RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 DUSP11O75319 330 aaKnown RBP27.62■■■□□ 2.01
TMEM54-201ENST00000329151 SNAI1O95863 264 aaPredicted RBP27.62■■■□□ 2.01
TMEM54-201ENST00000329151 C6orf222P0C671 652 aaPredicted RBP27.62■■■□□ 2.01
TMEM54-201ENST00000329151 TRIM43Q96BQ3 446 aaPredicted RBP27.62■■■□□ 2.01
TMEM54-201ENST00000329151 GMCL1Q96IK5 515 aa27.62■■■□□ 2.01
TMEM54-201ENST00000329151 GLT1D1Q96MS3 346 aa27.62■■■□□ 2.01
TMEM54-201ENST00000329151 TOMM22Q9NS69 142 aa27.62■■■□□ 2.01
TMEM54-201ENST00000329151 RANBP6O60518 1105 aaKnown RBP27.61■■■□□ 2.01
TMEM54-201ENST00000329151 ADAMTS4O75173 837 aa27.61■■■□□ 2.01
TMEM54-201ENST00000329151 MCCP23508 829 aa27.61■■■□□ 2.01
TMEM54-201ENST00000329151 RRP1P56182 461 aaKnown RBP27.61■■■□□ 2.01
TMEM54-201ENST00000329151 NOL8Q76FK4 1167 aaKnown RBP27.61■■■□□ 2.01
TMEM54-201ENST00000329151 STAG1Q8WVM7 1258 aa27.61■■■□□ 2.01
TMEM54-201ENST00000329151 EVI5LQ96CN4 794 aa27.61■■■□□ 2.01
TMEM54-201ENST00000329151 MTMR7Q9Y216 660 aa27.61■■■□□ 2.01
TMEM54-201ENST00000329151 CUL9Q8IWT3 2517 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 CTDSPL2Q05D32 466 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 KCNA10Q16322 511 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 TKFCQ3LXA3 575 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 C9orf50Q5SZB4 431 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 CCDC129Q6ZRS4 1044 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 ARMCX2Q7L311 632 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 RNF146Q9NTX7 359 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 MROH7Q68CQ1 1323 aa27.6■■■□□ 2.01
TMEM54-201ENST00000329151 FPGSQ05932 587 aa27.59■■■□□ 2.01
TMEM54-201ENST00000329151 CCDC144BQ3MJ40 725 aa27.59■■■□□ 2.01
TMEM54-201ENST00000329151 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.59■■■□□ 2.01
TMEM54-201ENST00000329151 RNPC3Q96LT9 517 aaKnown RBP27.59■■■□□ 2.01
TMEM54-201ENST00000329151 LAMA2P24043 3122 aaKnown RBP27.58■■■□□ 2.01
TMEM54-201ENST00000329151 KIAA0355O15063 1070 aa27.58■■■□□ 2.01
TMEM54-201ENST00000329151 ALAS1P13196 640 aa27.58■■■□□ 2.01
TMEM54-201ENST00000329151 CCDC96Q2M329 555 aa27.58■■■□□ 2.01
TMEM54-201ENST00000329151 CCDC174Q6PII3 467 aa27.58■■■□□ 2.01
TMEM54-201ENST00000329151 KCTD1Q719H9 257 aa27.58■■■□□ 2.01
TMEM54-201ENST00000329151 GNASQ5JWF2 1037 aa27.57■■■□□ 2
TMEM54-201ENST00000329151 RCSD1Q6JBY9 416 aa27.57■■■□□ 2
TMEM54-201ENST00000329151 CCDC144CPQ8IYA2 1237 aa27.57■■■□□ 2
TMEM54-201ENST00000329151 KLHDC9Q8NEP7 349 aa27.57■■■□□ 2
TMEM54-201ENST00000329151 TOX2Q96NM4 488 aa27.57■■■□□ 2
TMEM54-201ENST00000329151 TRERF1Q96PN7 1200 aa27.57■■■□□ 2
TMEM54-201ENST00000329151 ASB14A6NK59 587 aa27.56■■■□□ 2
TMEM54-201ENST00000329151 AGBL1Q96MI9 1066 aa27.56■■■□□ 2
TMEM54-201ENST00000329151 HELLSQ9NRZ9 838 aa27.56■■■□□ 2
TMEM54-201ENST00000329151 ELP1O95163 1332 aa27.56■■■□□ 2
TMEM54-201ENST00000329151 TLR3O15455 904 aaKnown RBP27.55■■■□□ 2
TMEM54-201ENST00000329151 CST5P28325 142 aaPredicted RBP27.55■■■□□ 2
TMEM54-201ENST00000329151 SMAD3P84022 425 aaKnown RBP27.55■■■□□ 2
TMEM54-201ENST00000329151 RRP12Q5JTH9 1297 aaKnown RBP27.55■■■□□ 2
TMEM54-201ENST00000329151 ANKRD33Q7Z3H0 272 aa27.55■■■□□ 2
TMEM54-201ENST00000329151 CRBNQ96SW2 442 aa27.55■■■□□ 2
TMEM54-201ENST00000329151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.55■■■□□ 2
TMEM54-201ENST00000329151 A0A0C4DFX4 3053 aa27.54■■■□□ 2
TMEM54-201ENST00000329151 PLA2G6O60733 806 aa27.54■■■□□ 2
TMEM54-201ENST00000329151 ASGR1P07306 291 aa27.54■■■□□ 2
TMEM54-201ENST00000329151 CNTN2Q02246 1040 aa27.54■■■□□ 2
TMEM54-201ENST00000329151 A1CFQ9NQ94 594 aaKnown RBP27.54■■■□□ 2
TMEM54-201ENST00000329151 CCPG1Q9ULG6 757 aa27.54■■■□□ 2
TMEM54-201ENST00000329151 A0A0U1RQG5 324 aaPredicted RBP27.53■■■□□ 2
TMEM54-201ENST00000329151 TRIM6-TRIM34B2RNG4 842 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 GJA9P57773 515 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 TNFAIP2Q03169 654 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 FAAP100Q0VG06 881 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 DCAF4Q8WV16 495 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 GUCD1Q96NT3 240 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 AP5M1Q9H0R1 490 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 ANAPC4Q9UJX5 808 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 PRR12Q9ULL5 1215 aa27.53■■■□□ 2
TMEM54-201ENST00000329151 MYADML2A6NDP7 307 aa27.52■■■□□ 2
TMEM54-201ENST00000329151 NMT2O60551 498 aa27.52■■■□□ 2
TMEM54-201ENST00000329151 PDE1AP54750 535 aa27.52■■■□□ 2
TMEM54-201ENST00000329151 MCMDC2Q4G0Z9 681 aa27.52■■■□□ 2
TMEM54-201ENST00000329151 NSMFQ6X4W1 530 aa27.52■■■□□ 2
TMEM54-201ENST00000329151 FAM133AQ8N9E0 248 aa27.52■■■□□ 2
TMEM54-201ENST00000329151 UPF3AQ9H1J1 476 aaKnown RBP27.52■■■□□ 2
TMEM54-201ENST00000329151 ORC4O43929 436 aa27.51■■□□□ 1.99
TMEM54-201ENST00000329151 ZEB2O60315 1214 aa27.51■■□□□ 1.99
TMEM54-201ENST00000329151 VPS53Q5VIR6 699 aa27.51■■□□□ 1.99
TMEM54-201ENST00000329151 FGD4Q96M96 766 aa27.51■■□□□ 1.99
TMEM54-201ENST00000329151 INCENPQ9NQS7 918 aa27.51■■□□□ 1.99
TMEM54-201ENST00000329151 IL17RBQ9NRM6 502 aa27.51■■□□□ 1.99
TMEM54-201ENST00000329151 SALL3Q9BXA9 1300 aa27.5■■□□□ 1.99
TMEM54-201ENST00000329151 TIMP1P01033 207 aa27.5■■□□□ 1.99
TMEM54-201ENST00000329151 ITGB8P26012 769 aa27.5■■□□□ 1.99
TMEM54-201ENST00000329151 SNAP25P60880 206 aa27.5■■□□□ 1.99
TMEM54-201ENST00000329151 HDAC1Q13547 482 aaPredicted RBP27.5■■□□□ 1.99
TMEM54-201ENST00000329151 ALX1Q15699 326 aa27.5■■□□□ 1.99
TMEM54-201ENST00000329151 CCSAPQ6IQ19 270 aaPredicted RBP27.5■■□□□ 1.99
TMEM54-201ENST00000329151 SEMA6BQ9H3T3 888 aa27.5■■□□□ 1.99
TMEM54-201ENST00000329151 ZNF536O15090 1300 aa27.49■■□□□ 1.99
TMEM54-201ENST00000329151 ARVCFO00192 962 aa27.49■■□□□ 1.99
TMEM54-201ENST00000329151 MFAP1P55081 439 aaKnown RBP27.49■■□□□ 1.99
TMEM54-201ENST00000329151 PPIGQ13427 754 aaKnown RBP eCLIP27.49■■□□□ 1.99
TMEM54-201ENST00000329151 TICAM2Q86XR7 235 aa27.49■■□□□ 1.99
TMEM54-201ENST00000329151 RILPL2Q969X0 211 aa27.49■■□□□ 1.99
TMEM54-201ENST00000329151 TOP1P11387 765 aaKnown RBP27.48■■□□□ 1.99
TMEM54-201ENST00000329151 TLK2Q86UE8 772 aa27.48■■□□□ 1.99
TMEM54-201ENST00000329151 TMEM199Q8N511 208 aa27.48■■□□□ 1.99
TMEM54-201ENST00000329151 CDX2Q99626 313 aaPredicted RBP27.48■■□□□ 1.99
TMEM54-201ENST00000329151 ADD3Q9UEY8 706 aaKnown RBP27.48■■□□□ 1.99
TMEM54-201ENST00000329151 SOWAHBA6NEL2 793 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms