RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CCDC93Q567U6 631 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 SCYL2Q6P3W7 929 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 GLG1Q92896 1179 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 TBX22Q9Y458 520 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 ARHGEF16Q5VV41 709 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 EFCC1Q9HA90 598 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 MTMR6Q9Y217 621 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 RGS12O14924 1447 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 LUC7L3O95232 432 aaKnown RBP23.04■■□□□ 1.28
RNF40-201ENST00000324685 SCG2P13521 617 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.04■■□□□ 1.28
RNF40-201ENST00000324685 POLR2MP0CAP2 368 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 PRR16Q569H4 304 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
RNF40-201ENST00000324685 ABCC4O15439 1325 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 PNMA2Q9UL42 364 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 ALDH1B1P30837 517 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 POLR2BP30876 1174 aaKnown RBP23.03■■□□□ 1.28
RNF40-201ENST00000324685 DLGAP5Q15398 846 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 TEKT3Q9BXF9 490 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 DDX25Q9UHL0 483 aaKnown RBP23.03■■□□□ 1.28
RNF40-201ENST00000324685 ATP1A2P50993 1020 aa23.03■■□□□ 1.28
RNF40-201ENST00000324685 KCNA6P17658 529 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.02■■□□□ 1.28
RNF40-201ENST00000324685 SCYL1Q96KG9 808 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 BZW2Q9Y6E2 419 aaKnown RBP23.02■■□□□ 1.28
RNF40-201ENST00000324685 LPXNO60711 386 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 OPHN1O60890 802 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 BFSP1Q12934 665 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 PDE1CQ14123 709 aaPredicted RBP23.02■■□□□ 1.28
RNF40-201ENST00000324685 RINT1Q6NUQ1 792 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 FNBP4Q8N3X1 1017 aaPredicted RBP23.02■■□□□ 1.28
RNF40-201ENST00000324685 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
RNF40-201ENST00000324685 AOC3Q16853 763 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 ADCY9O60503 1353 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 BCAS4Q8TDM0 211 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 LRRC8CQ8TDW0 803 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 MICAL1Q8TDZ2 1067 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 NCKAP5LQ9HCH0 1330 aa23.02■■□□□ 1.28
RNF40-201ENST00000324685 SSH3Q8TE77 659 aa23.02■■□□□ 1.27
RNF40-201ENST00000324685 FANCLQ9NW38 375 aa23.02■■□□□ 1.27
RNF40-201ENST00000324685 TPCN1Q9ULQ1 816 aa23.02■■□□□ 1.27
RNF40-201ENST00000324685 EIF3CLB5ME19 914 aaKnown RBP23.01■■□□□ 1.27
RNF40-201ENST00000324685 USP17L12C9JPN9 530 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 USP17L21D6R901 530 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 CAPN9O14815 690 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 BAG2O95816 211 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 ADAM9Q13443 819 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 TCIRG1Q13488 830 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 FAM178BQ8IXR5 827 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 EIF3CQ99613 913 aaKnown RBP23.01■■□□□ 1.27
RNF40-201ENST00000324685 PCDHA7Q9UN72 937 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 LMNB2Q03252 620 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 MCF2L2Q86YR7 1114 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 CDKL2Q92772 493 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 GOLGA8QA0A0J9YX86 632 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 GOLGA8OA6NCC3 632 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 GOLGA8NF8WBI6 632 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 PLCB4Q15147 1175 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 XKR9Q5GH70 373 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 EPN1Q9Y6I3 576 aaPredicted RBP23.01■■□□□ 1.27
RNF40-201ENST00000324685 A0A0D9SFI3 127 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 OATP04181 439 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 KRT26Q7Z3Y9 468 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 MLXIPQ9HAP2 919 aa23.01■■□□□ 1.27
RNF40-201ENST00000324685 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
RNF40-201ENST00000324685 PTH1RQ03431 593 aa23■■□□□ 1.27
RNF40-201ENST00000324685 BIRC2Q13490 618 aa23■■□□□ 1.27
RNF40-201ENST00000324685 TRIM56Q9BRZ2 755 aaKnown RBP23■■□□□ 1.27
RNF40-201ENST00000324685 HESX1Q9UBX0 185 aa23■■□□□ 1.27
RNF40-201ENST00000324685 ZNF215Q9UL58 517 aaPredicted RBP23■■□□□ 1.27
RNF40-201ENST00000324685 FAM135BQ49AJ0 1406 aa23■■□□□ 1.27
RNF40-201ENST00000324685 COPB1P53618 953 aaKnown RBP23■■□□□ 1.27
RNF40-201ENST00000324685 TRIM68Q6AZZ1 485 aa23■■□□□ 1.27
RNF40-201ENST00000324685 CFAP61Q8NHU2 1237 aa23■■□□□ 1.27
RNF40-201ENST00000324685 TNKSO95271 1327 aa23■■□□□ 1.27
RNF40-201ENST00000324685 TESPA1A2RU30 521 aaPredicted RBP23■■□□□ 1.27
RNF40-201ENST00000324685 GOLGA8CPA6NN73 597 aa23■■□□□ 1.27
RNF40-201ENST00000324685 NIM1KQ8IY84 436 aa23■■□□□ 1.27
RNF40-201ENST00000324685 CUEDC2Q9H467 287 aa23■■□□□ 1.27
RNF40-201ENST00000324685 STAG1Q8WVM7 1258 aa23■■□□□ 1.27
RNF40-201ENST00000324685 SLC5A4Q9NY91 659 aa23■■□□□ 1.27
RNF40-201ENST00000324685 ATP8B1O43520 1251 aa23■■□□□ 1.27
RNF40-201ENST00000324685 LMNB1P20700 586 aa23■■□□□ 1.27
RNF40-201ENST00000324685 DNAJC10Q8IXB1 793 aa23■■□□□ 1.27
RNF40-201ENST00000324685 SDCCAG3Q96C92 435 aa23■■□□□ 1.27
RNF40-201ENST00000324685 LARSQ9P2J5 1176 aaKnown RBP23■■□□□ 1.27
RNF40-201ENST00000324685 A0A1W2PQ27 194 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 A0A1W2PQ64 194 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 A0A1W2PQD8 194 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 EVI5O60447 810 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 HSPD1P10809 573 aaKnown RBP22.99■■□□□ 1.27
RNF40-201ENST00000324685 GSPT1P15170 499 aaKnown RBP22.99■■□□□ 1.27
RNF40-201ENST00000324685 SNCBQ16143 134 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 ARMCX5Q6P1M9 558 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 RABGGTAQ92696 567 aa22.99■■□□□ 1.27
RNF40-201ENST00000324685 IPO11Q9UI26 975 aaKnown RBP22.99■■□□□ 1.27
RNF40-201ENST00000324685 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
RNF40-201ENST00000324685 DMP1Q13316 513 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms