RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DLX2Q07687 328 aaPredicted RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 MKRN4PQ13434 485 aaPredicted RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 ITGA7Q13683 1181 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 EPC2Q52LR7 807 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 WDR66Q8TBY9 1149 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 C17orf80Q9BSJ5 609 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 MOV10L1Q9BXT6 1211 aaKnown RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 FTOQ9C0B1 505 aaKnown RBP eCLIP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 HERC5Q9UII4 1024 aaKnown RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 NLRC5Q86WI3 1866 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 MROH5Q6ZUA9 1318 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 ABHD14A-ACY1A0A1B0GW23 586 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 MYADML2A6NDP7 307 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 LRP3O75074 770 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 DDX58O95786 925 aaKnown RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 HNRNPUQ00839 825 aaKnown RBP eCLIP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 N4BP2L1Q5TBK1 243 aaPredicted RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 TRMT2AQ8IZ69 625 aaKnown RBP8.29□□□□□ -1.08
CSTF3-201ENST00000323959 SUSD6Q92537 303 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 POLR3GLQ9BT43 218 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 NR2E1Q9Y466 385 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 DDTLA6NHG4 134 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-201ENST00000323959 ZEB2O60315 1214 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 RB1P06400 928 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 C6orf222P0C671 652 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-201ENST00000323959 NDUFV1P49821 464 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 C19orf57Q0VDD7 668 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 CNKSR3Q6P9H4 555 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 EFHBQ8N7U6 833 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 MB21D1Q8N884 522 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 HTRA4P83105 476 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-201ENST00000323959 ZNF528Q3MIS6 628 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 PDZD3Q86UT5 571 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 VPS37DQ86XT2 251 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 YTHDC1Q96MU7 727 aaKnown RBP8.28□□□□□ -1.08
CSTF3-201ENST00000323959 TRPV6Q9H1D0 765 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 INCENPQ9NQS7 918 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 EMILIN3Q9NT22 766 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 USP18Q9UMW8 372 aa8.28□□□□□ -1.08
CSTF3-201ENST00000323959 SP9P0CG40 484 aa8.27□□□□□ -1.08
CSTF3-201ENST00000323959 FCER1AP12319 257 aa8.27□□□□□ -1.08
CSTF3-201ENST00000323959 ZNF792Q3KQV3 632 aa8.27□□□□□ -1.08
CSTF3-201ENST00000323959 RPGRIP1Q96KN7 1286 aa8.27□□□□□ -1.08
CSTF3-201ENST00000323959 RXFP3Q9NSD7 469 aa8.27□□□□□ -1.08
CSTF3-201ENST00000323959 ZNFX1Q9P2E3 1918 aaKnown RBP8.27□□□□□ -1.09
CSTF3-201ENST00000323959 C1QTNF9BB2RNN3 333 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 C1QTNF9P0C862 333 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 COPB2P35606 906 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 USP14P54578 494 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 SPATC1LQ9H0A9 340 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 RWDD3Q9Y3V2 267 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 ARHGAP6O43182 974 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 TBC1D4O60343 1298 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 IQCF3P0C7M6 154 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 TAL1P17542 331 aaPredicted RBP8.27□□□□□ -1.09
CSTF3-201ENST00000323959 BFSP2Q13515 415 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 GCKRQ14397 625 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 CAVIN4Q5BKX8 364 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 GNASQ5JWF2 1037 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
CSTF3-201ENST00000323959 LENG1Q96BZ8 264 aaPredicted RBP8.27□□□□□ -1.09
CSTF3-201ENST00000323959 TMEM121BQ9BXQ6 578 aaPredicted RBP8.27□□□□□ -1.09
CSTF3-201ENST00000323959 ADAMTS20P59510 1910 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 EP300Q09472 2414 aaPredicted RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 FRAT2O75474 233 aaPredicted RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 SLC25A27O95847 323 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 ERCC3P19447 782 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 IFIT5Q13325 482 aaKnown RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 ALDH8A1Q9H2A2 487 aaPredicted RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 PNNQ9H307 717 aaKnown RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 DMXL1Q9Y485 3027 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 C5orf67F2Z3F1 127 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 MAP3K13O43283 966 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 TGM1P22735 817 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 TMEM192Q8IY95 271 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 FAM9BQ8IZU0 186 aa8.26□□□□□ -1.09
CSTF3-201ENST00000323959 ZCCHC14Q8WYQ9 949 aaKnown RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 RNF216Q9NWF9 866 aaPredicted RBP8.26□□□□□ -1.09
CSTF3-201ENST00000323959 MROH7-TTC4A0A0A0MT08 1334 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 ZNF462Q96JM2 2506 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 ZBTB22O15209 634 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
CSTF3-201ENST00000323959 FBXO11Q86XK2 927 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 MAGEB6Q8N7X4 407 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 TANGO6Q9C0B7 1094 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 CLEC1BQ9P126 229 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 ZFYVE26Q68DK2 2539 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 CTAGE5O15320 804 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 LIMK1P53667 647 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 WDR43Q15061 677 aaKnown RBP eCLIP8.25□□□□□ -1.09
CSTF3-201ENST00000323959 MAMDC4Q6UXC1 1216 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 SLF2Q8IX21 1173 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 GMEB2Q9UKD1 530 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 ADAMTS8Q9UP79 889 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 GRIN2DO15399 1336 aa8.25□□□□□ -1.09
CSTF3-201ENST00000323959 BRD1O95696 1058 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms