RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 TKFCQ3LXA3 575 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CWC27Q6UX04 472 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 PI16Q6UXB8 463 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 RALYLQ86SE5 291 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ADGRA1Q86SQ6 560 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 FAM160B2Q86V87 743 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 MB21D2Q8IYB1 491 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 C2orf69Q8N8R5 385 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF274Q96GC6 653 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 LLPHQ9BRT6 129 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 KIAA1683Q9H0B3 1180 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 DEFB129Q9H1M3 183 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ARMT1Q9H993 441 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 GOPCQ9HD26 462 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 SAGE1Q9NXZ1 904 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 LOXHD1Q8IVV2 1947 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 SNAP23O00161 211 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 FOXP2O15409 715 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 DHX16O60231 1041 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 TOP1P11387 765 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CAP2P40123 477 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 GRM5P41594 1212 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ECE1P42892 770 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 SMCPP49901 116 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ASPRV1Q53RT3 343 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 GPATCH4Q5T3I0 446 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 USP17L2Q6R6M4 530 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 DHX32Q7L7V1 743 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 FASTKD5Q7L8L6 764 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ERO1BQ86YB8 467 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF444Q8N0Y2 327 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 MB21D1Q8N884 522 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 TRPM4Q8TD43 1214 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CDCA5Q96FF9 252 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 FAM227BQ96M60 508 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CSRNP1Q96S65 589 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 MCM9Q9NXL9 1143 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CSADQ9Y600 493 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 MANSC4A6NHS7 340 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 USP17L5A8MUK1 530 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 GPR25O00155 361 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 WDR46O15213 610 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CA12O43570 354 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CDKL5O76039 1030 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 TTLL1O95922 423 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 SNHG28P0DPA3 235 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 KIF5BP33176 963 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 EPS15P42566 896 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CDK8P49336 464 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 SREBF2Q12772 1141 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 RASA3Q14644 834 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ANGEL2Q5VTE6 544 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 BTNL9Q6UXG8 535 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 RIPOR1Q6ZS17 1223 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 KRT26Q7Z3Y9 468 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF589Q86UQ0 364 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CRACR2BQ8N4Y2 399 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ZSCAN1Q8NBB4 408 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 TGFBRAP1Q8WUH2 860 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 KLRG1Q96E93 195 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 NEK1Q96PY6 1258 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 KCTD15Q96SI1 283 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ANO2Q9NQ90 1003 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CYP46A1Q9Y6A2 500 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 RASSF10A6NK89 507 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 PHF20L1A8MW92 1017 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 E7EWF7 191 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 RPS6KB1P23443 525 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 SHMT1P34896 483 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 EXOSC10Q01780 885 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 GHRHRQ02643 423 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 RUFY3Q7L099 469 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ANKRD23Q86SG2 305 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ADAM32Q8TC27 787 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 INTS4Q96HW7 963 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 C22orf23Q9BZE7 217 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 TDRD3Q9H7E2 651 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 PALD1Q9ULE6 856 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 MORC2Q9Y6X9 1032 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 LRRC37A2A6NM11 1700 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 TTLL8A6PVC2 850 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ATP2A1O14983 1001 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 HOXC6P09630 235 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 RASA1P20936 1047 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 HOXA7P31268 230 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 GTF2A2P52657 109 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 HIRAP54198 1017 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 DYNLL1P63167 89 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 ABCB5Q2M3G0 1257 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CERKLQ49MI3 558 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 OTUD7BQ6GQQ9 843 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 GALNT17Q6IS24 598 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 CPLX2Q6PUV4 134 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 WASF1Q92558 559 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 MKNK2Q9HBH9 465 aa3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 GBA2Q9HCG7 927 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-201ENST00000320280 DDX4Q9NQI0 724 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms