RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 KATNBL1Q9H079 304 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 UPF3AQ9H1J1 476 aaKnown RBP16.95■□□□□ 0.3
RPP40-201ENST00000319533 ABHD16BQ9H3Z7 469 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
RPP40-201ENST00000319533 TMEM39AQ9NV64 488 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
RPP40-201ENST00000319533 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 MYADML2A6NDP7 307 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 ADCY6O43306 1168 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 GJA9P57773 515 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 FPGSQ05932 587 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 ANKRD35Q8N283 1001 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 PI4K2BQ8TCG2 481 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
RPP40-201ENST00000319533 TBX21Q9UL17 535 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 VCANP13611 3396 aa16.94■□□□□ 0.3
RPP40-201ENST00000319533 TIMP1P01033 207 aa16.93■□□□□ 0.3
RPP40-201ENST00000319533 APPP05067 770 aa16.93■□□□□ 0.3
RPP40-201ENST00000319533 BMP3P12645 472 aa16.93■□□□□ 0.3
RPP40-201ENST00000319533 SLFN13Q68D06 897 aa16.93■□□□□ 0.3
RPP40-201ENST00000319533 LRRC47Q8N1G4 583 aaKnown RBP16.93■□□□□ 0.3
RPP40-201ENST00000319533 PCSK9Q8NBP7 692 aaKnown RBP16.93■□□□□ 0.3
RPP40-201ENST00000319533 GMCL1Q96IK5 515 aa16.93■□□□□ 0.3
RPP40-201ENST00000319533 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
RPP40-201ENST00000319533 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
RPP40-201ENST00000319533 CTDP1Q9Y5B0 961 aaPredicted RBP16.93■□□□□ 0.3
RPP40-201ENST00000319533 CTAGE5O15320 804 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 PLA2G6O60733 806 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 PDE4BQ07343 736 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 CCDC144BQ3MJ40 725 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 ARMCX2Q7L311 632 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 FAM133AQ8N9E0 248 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 MAFAQ8NHW3 353 aaPredicted RBP16.92■□□□□ 0.3
RPP40-201ENST00000319533 GLT1D1Q96MS3 346 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 SEC62Q99442 399 aaKnown RBP16.92■□□□□ 0.3
RPP40-201ENST00000319533 ZNF536O15090 1300 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 MROH7Q68CQ1 1323 aa16.92■□□□□ 0.3
RPP40-201ENST00000319533 MCM3APO60318 1980 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.91■□□□□ 0.3
RPP40-201ENST00000319533 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.91■□□□□ 0.3
RPP40-201ENST00000319533 ERC2O15083 957 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 ASGR1P07306 291 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 C6orf222P0C671 652 aaPredicted RBP16.91■□□□□ 0.3
RPP40-201ENST00000319533 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
RPP40-201ENST00000319533 TFAP4Q01664 338 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 PPARAQ07869 468 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 STAG1Q8WVM7 1258 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 MYLIPQ8WY64 445 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
RPP40-201ENST00000319533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
RPP40-201ENST00000319533 SPTBN5Q9NRC6 3674 aaKnown RBP16.91■□□□□ 0.3
RPP40-201ENST00000319533 PRUNE2Q8WUY3 3088 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 TMEM232C9JQI7 657 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 ARVCFO00192 962 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
RPP40-201ENST00000319533 NOVP48745 357 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 STAT2P52630 851 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 TKFCQ3LXA3 575 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 PPP4R3BQ5MIZ7 849 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 CCDC144CPQ8IYA2 1237 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 NAPBQ9H115 298 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
RPP40-201ENST00000319533 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
RPP40-201ENST00000319533 FOXP2O15409 715 aa16.89■□□□□ 0.29
RPP40-201ENST00000319533 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
RPP40-201ENST00000319533 CNTN2Q02246 1040 aa16.89■□□□□ 0.29
RPP40-201ENST00000319533 GNASQ5JWF2 1037 aa16.89■□□□□ 0.29
RPP40-201ENST00000319533 RASIP1Q5U651 963 aa16.89■□□□□ 0.29
RPP40-201ENST00000319533 C16orf59Q7L2K0 433 aa16.89■□□□□ 0.29
RPP40-201ENST00000319533 A1CFQ9NQ94 594 aaKnown RBP16.89■□□□□ 0.29
RPP40-201ENST00000319533 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
RPP40-201ENST00000319533 SOWAHBA6NEL2 793 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 SLC1A4P43007 532 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 PPIGQ13427 754 aaKnown RBP eCLIP16.88■□□□□ 0.29
RPP40-201ENST00000319533 FAM126BQ8IXS8 530 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 SLC43A3Q8NBI5 491 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 OTUD7AQ8TE49 926 aaPredicted RBP16.88■□□□□ 0.29
RPP40-201ENST00000319533 AGBL1Q96MI9 1066 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.29
RPP40-201ENST00000319533 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 IL17RBQ9NRM6 502 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 RNF146Q9NTX7 359 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
RPP40-201ENST00000319533 ASTN1O14525 1302 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 SALL3Q9BXA9 1300 aa16.88■□□□□ 0.29
RPP40-201ENST00000319533 ASB14A6NK59 587 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 CD4P01730 458 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 FOSL2P15408 326 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 MCCP23508 829 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 DNAJB2P25686 324 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 TMEM240Q5SV17 173 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms