RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SLC4A4Q9Y6R1 1079 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 ZSCAN5CA6NGD5 496 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 MOCS3O95396 460 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 SEC24CP53992 1094 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 LRRC10BA6NIK2 292 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 RPN1P04843 607 aaKnown RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 SSBP05455 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 UBE3CQ15386 1083 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 TICAM2Q86XR7 235 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 POTEDQ86YR6 584 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 IFT81Q8WYA0 676 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 IQSEC3Q9UPP2 1182 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 MEGF6O75095 1541 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 BCL9O00512 1426 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 CCDC196A0A1B0GTZ2 297 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 PATL2C9JE40 543 aaKnown RBP10.78□□□□□ -0.68
PTPRA-202ENST00000318266 HSF2BPO75031 334 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 XBP1P17861 261 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 CYLC1P35663 651 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-202ENST00000318266 ATP6V1AP38606 617 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 GUCY2FP51841 1108 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 RNASE9P60153 205 aaKnown RBP10.78□□□□□ -0.68
PTPRA-202ENST00000318266 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-202ENST00000318266 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 KRT23Q9C075 422 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 PP2D1A8MPX8 630 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 LGALS16A8MUM7 142 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 GSG1L2A8MUP6 293 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 ADAMTS3O15072 1205 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 NKRFO15226 690 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPRA-202ENST00000318266 USP8P40818 1118 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 NNTQ13423 1086 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 TYW1BQ6NUM6 668 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 CREG2Q8IUH2 290 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 SPATA4Q8NEY3 305 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 TTLL11Q8NHH1 800 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 SDR42E1Q8WUS8 393 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 RPGRIP1Q96KN7 1286 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 ZIM3Q96PE6 472 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 DNAJC7Q99615 494 aa10.78□□□□□ -0.68
PTPRA-202ENST00000318266 MAGEC2Q9UBF1 373 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-202ENST00000318266 CASZ1Q86V15 1759 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 TNKSO95271 1327 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.68
PTPRA-202ENST00000318266 NAP1L1P55209 391 aaKnown RBP10.77□□□□□ -0.68
PTPRA-202ENST00000318266 TBC1D8BQ0IIM8 1120 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 ZNF658Q5TYW1 1059 aaPredicted RBP10.77□□□□□ -0.68
PTPRA-202ENST00000318266 GBP6Q6ZN66 633 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 FERMT2Q96AC1 680 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 CABS1Q96KC9 395 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 CNNM2Q9H8M5 875 aa10.77□□□□□ -0.68
PTPRA-202ENST00000318266 ARFGEF2Q9Y6D5 1785 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 TCRBV5S4A2TA0A5A2 114 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 GOLGA8KD6RF30 607 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 OPA1O60313 960 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 STAT6P42226 847 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 ACTN3Q08043 901 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 PKN1Q16512 942 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 IQCEQ6IPM2 695 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 MS4A14Q96JA4 679 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 RNPC3Q96LT9 517 aaKnown RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC42Q96M95 316 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC43Q96MW1 224 aaKnown RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 CAPN11Q9UMQ6 739 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 PHRF1Q9P1Y6 1649 aaKnown RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 WDR17Q8IZU2 1322 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 CYP2D7A0A087X1C5 515 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 BACH1O14867 736 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 ZNF263O14978 683 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 ATP2C2O75185 946 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 VEGFAP15692 232 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-202ENST00000318266 IFT88Q13099 833 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 SPA17Q15506 151 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 IL17AQ16552 155 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 PDXDC2PQ6P474 469 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 TOM1L2Q6ZVM7 507 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 SH3GL2Q99962 352 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 NFU1Q9UMS0 254 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 SNX12Q9UMY4 172 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 RIPOR2Q9Y4F9 1068 aa10.77□□□□□ -0.69
PTPRA-202ENST00000318266 BUB1O43683 1085 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 MYCNP04198 464 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-202ENST00000318266 FAM153BP0C7A2 387 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 SF3A3Q12874 501 aaKnown RBP eCLIP10.76□□□□□ -0.699e-7■■■□□ 18.6
PTPRA-202ENST00000318266 FAM153CQ494X1 144 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 C8orf74Q6P047 294 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 FAM196AQ6ZSG2 479 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 TUBGCP2Q9BSJ2 902 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 IFIH1Q9BYX4 1025 aaKnown RBP10.76□□□□□ -0.69
PTPRA-202ENST00000318266 FAM153AQ9UHL3 310 aa10.76□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC172P0C7W6 258 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms