RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 NRXN3Q9Y4C0 1643 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 BTBD18B2RXH4 712 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 EBAG9O00559 213 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 ITGA6P23229 1130 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 PDIA3P30101 505 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 TOB1P50616 345 aaPredicted RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 TSGA10IPQ3SY00 556 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 VPS37DQ86XT2 251 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 UBAP1Q9NZ09 502 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 TBC1D7Q9P0N9 293 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 CFAP45Q9UL16 551 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 CTAGE5O15320 804 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 PIAS1O75925 651 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 DAAM2Q86T65 1068 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 ATP2C2O75185 946 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 MCAMP43121 646 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 GCKRQ14397 625 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 LRRC41Q15345 812 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 SH2D4BQ5SQS7 431 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 OTUD6BQ8N6M0 293 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 TRIML1Q8N9V2 468 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 DHX58Q96C10 678 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 PYM1Q9BRP8 204 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 RRP15Q9Y3B9 282 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 CREB3O43889 395 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 PPP1R12BO60237 982 aaPredicted RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 UBXN2AP68543 259 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 EN1Q05925 392 aaPredicted RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 MTM1Q13496 603 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 PRKG1Q13976 671 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 IQCB1Q15051 598 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 ZYXQ15942 572 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 ZSCAN26Q16670 478 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 METTL24Q5JXM2 366 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 RAD9BQ6WBX8 426 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 GBP3Q9H0R5 595 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 AFG3L2Q9Y4W6 797 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 ME1P48163 572 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 SMC1AQ14683 1233 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 CCDC121Q6ZUS5 278 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 CCDC50Q8IVM0 306 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 STAG2Q8N3U4 1231 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 CTNNA3Q9UI47 895 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 LIMCH1Q9UPQ0 1083 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 KDM6AO15550 1401 aaPredicted RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 PLEKHG3A1L390 1219 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 KIF5CO60282 957 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 HSPD1P10809 573 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 MATR3P43243 847 aaKnown RBP eCLIP4.03□□□□□ -1.76
GEN1-201ENST00000317402 NT5C2P49902 561 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 ZSWIM2Q8NEG5 633 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CTDP1Q9Y5B0 961 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 HELZP42694 1942 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 LDHAL6AQ6ZMR3 332 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 N4BP2L2Q92802 583 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 RMDN2Q96LZ7 410 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CHP1Q99653 195 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 TAOK3Q9H2K8 898 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 FAM114A2Q9NRY5 505 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 UBN2Q6ZU65 1347 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SBNO1A3KN83 1393 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CCDC160A6NGH7 325 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 MARCH6O60337 910 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SKILP12757 684 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 PSMC4P43686 418 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 USPL1Q5W0Q7 1092 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 PPP1R13BQ96KQ4 1090 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 PWWP2AQ96N64 755 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 NUP62CLQ9H1M0 184 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 VPS16Q9H269 839 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 RNF19AQ9NV58 838 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 VPS18Q9P253 973 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SATB2Q9UPW6 733 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 TICRRQ7Z2Z1 1910 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SSBP05455 408 aaKnown RBP eCLIP4.03□□□□□ -1.76
GEN1-201ENST00000317402 ZFYP08048 801 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 SCNN1DP51172 638 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 PDCD2Q16342 344 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 SLC9C2Q5TAH2 1124 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 DAB2IPQ5VWQ8 1189 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SREK1Q8WXA9 508 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 CELF1Q92879 486 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 FAM217BQ9NTX9 383 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 CAMTA1Q9Y6Y1 1673 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SLIT2O94813 1529 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 URI1O94763 535 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 INPP5BP32019 993 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 TBC1D9BQ66K14 1250 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 ADAT2Q7Z6V5 191 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 MICAL1Q8TDZ2 1067 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 MORC4Q8TE76 937 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 GDAQ9Y2T3 454 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 USP31Q70CQ4 1352 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CARMIL3Q8ND23 1372 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CPLX1O14810 134 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 FGFR1OPO95684 399 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 PFKFB1P16118 471 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CLCN6P51797 869 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 GJB7Q6PEY0 223 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 KSR2Q6VAB6 950 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms