RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ERLIN1O75477 346 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 EIF3JO75822 258 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 FMNL1O95466 1100 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 TFRCP02786 760 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 RHOXF2BP0C7M4 288 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 KIF4BQ2VIQ3 1234 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 CATIPQ7Z7H3 387 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 FAM163AQ96GL9 167 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 RHOXF2Q9BQY4 288 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 RAB21Q9UL25 225 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 GAKO14976 1311 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 POTEB2H3BUK9 544 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 MORC3Q14149 939 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 MSANTD4Q8NCY6 345 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 PANX2Q96RD6 677 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 RGS22Q8NE09 1264 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 L1RE1Q9UN81 338 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 A0A1B0GTH6 734 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 RBL2Q08999 1139 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 RASGRP2Q7LDG7 609 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 PPFIBP1Q86W92 1011 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 USP40Q9NVE5 1235 aa19.37■□□□□ 0.69
SCAMP4-201ENST00000316097 IVLP07476 585 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 TSPY3P0CV98 308 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 TSPY8P0CW00 308 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 DPEP1P16444 411 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 TMED8Q6PL24 325 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 ZNF444Q8N0Y2 327 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 IGSF22Q8N9C0 903 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 MTA3Q9BTC8 594 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 V9GY48 417 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 KIAA1551Q9HCM1 1747 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 PCP11498 1178 aaKnown RBP19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 CDK8P49336 464 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 SARSP49591 514 aaKnown RBP19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 FOXR1Q6PIV2 292 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 SLF2Q8IX21 1173 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 AMOTL1Q8IY63 956 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 SHISA4Q96DD7 197 aa19.36■□□□□ 0.69
SCAMP4-201ENST00000316097 VEGFAP15692 232 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 RASA1P20936 1047 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 RBM5P52756 815 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 VSNL1P62760 191 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 NFIAQ12857 509 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 NT5DC1Q5TFE4 455 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 ZFPM1Q8IX07 1006 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 ELOA2Q8IYF1 753 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 SLC35F6Q8N357 371 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 CCDC102AQ96A19 550 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 STX8Q9UNK0 236 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 CTAGE9A4FU28 777 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 BTBD18B2RXH4 712 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 PHACTR2O75167 634 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 APOBEC3HQ6NTF7 200 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 NOSTRINQ8IVI9 506 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 TRIM22Q8IYM9 498 aa19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 PPP1R1BQ9UD71 204 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-201ENST00000316097 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 KCNA3P22001 575 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 KLHL10Q6JEL2 608 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 CDC42EP5Q6NZY7 148 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 EFCC1Q9HA90 598 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 FBXO2Q9UK22 296 aaPredicted RBP19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 CASP8Q14790 479 aa19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 SRBD1Q8N5C6 995 aaKnown RBP19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 NAA15Q9BXJ9 866 aaKnown RBP19.34■□□□□ 0.69
SCAMP4-201ENST00000316097 PLCG2P16885 1265 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 TOB1P50616 345 aaPredicted RBP19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 STX17P56962 302 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 FUT2Q10981 343 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 TCP10Q12799 353 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 DACT2Q5SW24 774 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 OXER1Q8TDS5 423 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 VPS54Q9P1Q0 977 aa19.33■□□□□ 0.69
SCAMP4-201ENST00000316097 BAZ2BQ9UIF8 2168 aaKnown RBP19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 YDJCA8MPS7 323 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 PPIP5K2O43314 1243 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 PTPREP23469 700 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 CRKP46108 304 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 NR5A1Q13285 461 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 PKN1Q16512 942 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 HSP90B2PQ58FF3 399 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 STAG2Q8N3U4 1231 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 TRIML1Q8N9V2 468 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 TEKT1Q969V4 418 aa19.33■□□□□ 0.68
SCAMP4-201ENST00000316097 NOP2P46087 812 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 APTXQ7Z2E3 356 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 TTLL6Q8N841 843 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 ACRBPQ8NEB7 543 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 MFAP3LO75121 409 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 ATP2B1P20020 1258 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 CLEC10AQ8IUN9 316 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 DIS3L2Q8IYB7 885 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 CPVLQ9H3G5 476 aa19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 KAT14Q9H8E8 782 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms