RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 JAKMIP2Q96AA8 810 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 TPH2Q8IWU9 490 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 OR8K1Q8NGG5 319 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 NAPGQ99747 312 aaPredicted RBP6.9□□□□□ -1.3
PRKDC-201ENST00000314191 SARM1Q6SZW1 724 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 PSMB7Q99436 277 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 PSDA5PKW4 1024 aaPredicted RBP6.9□□□□□ -1.3
PRKDC-201ENST00000314191 ADRA2BP18089 450 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 TBC1D16Q8TBP0 767 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 MXD3Q9BW11 206 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 AMNQ9BXJ7 453 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 FBXO2Q9UK22 296 aaPredicted RBP6.9□□□□□ -1.3
PRKDC-201ENST00000314191 BACH1O14867 736 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 HSPA1LP34931 641 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 GRIN1Q05586 938 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 TRIM14Q14142 442 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 GPATCH4Q5T3I0 446 aaKnown RBP6.9□□□□□ -1.31
PRKDC-201ENST00000314191 TDRD3Q9H7E2 651 aaKnown RBP6.9□□□□□ -1.31
PRKDC-201ENST00000314191 GOLGA6L10A6NI86 522 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 CDC25BP30305 580 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 RIOK1Q9BRS2 568 aaKnown RBP6.9□□□□□ -1.31
PRKDC-201ENST00000314191 GTF2F1P35269 517 aaKnown RBP eCLIP6.9□□□□□ -1.31
PRKDC-201ENST00000314191 KRT222Q8N1A0 295 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 CRKP46108 304 aa6.9□□□□□ -1.31
PRKDC-201ENST00000314191 LARP4BQ92615 738 aaKnown RBP6.9□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC169A6NNP5 214 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 H7C1D1 291 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 DHX40Q8IX18 779 aaKnown RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 PPP1R13BQ96KQ4 1090 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CNOT6LQ96LI5 555 aaKnown RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 PANK4Q9NVE7 773 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 ERCC6LQ2NKX8 1250 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 MAP9Q49MG5 647 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 PLA2G4DQ86XP0 818 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CLEC10AQ8IUN9 316 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 KIAA1024Q9UPX6 916 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 PHACTR2O75167 634 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 ALAS1P13196 640 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.318e-8■■□□□ 13.1
PRKDC-201ENST00000314191 MIGA2Q7L4E1 593 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC94Q9BW85 323 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 JCADQ9P266 1359 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 NPR1P16066 1061 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 RPL13P26373 211 aaKnown RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 TYW1BQ6NUM6 668 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 RRAGAQ7L523 313 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 VSTM4Q8IW00 320 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 NT5C3AQ9H0P0 336 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 KANSL2Q9H9L4 492 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CKAP4Q07065 602 aaKnown RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 ASPRV1Q53RT3 343 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CHURC1Q8WUH1 139 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 PCDHB13Q9Y5F0 798 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 STX10O60499 249 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 BMP3P12645 472 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 DNM2P50570 870 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 SEPT2Q15019 361 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CC2D2BQ6DHV5 1058 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 SMCR8Q8TEV9 937 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 ADGRA1Q86SQ6 560 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 EXOC3O60645 756 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■■■■■ 66.1
PRKDC-201ENST00000314191 SP8Q8IXZ3 490 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 NUP58Q9BVL2 599 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 GCNT3O95395 438 aa6.89□□□□□ -1.31
PRKDC-201ENST00000314191 POLR2FP61218 127 aaKnown RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 ZNF658Q5TYW1 1059 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
PRKDC-201ENST00000314191 TMEM110-MUSTN1A8MSY1 372 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L15C9J2P7 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L13C9JLJ4 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L11C9JVI0 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L18D6R9N7 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L22D6RA61 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L17D6RBQ6 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L19D6RCP7 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L20D6RJB6 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 KLHL30Q0D2K2 578 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L24Q0WX57 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L6PQ6QN14 398 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 FAM212AQ96EL1 285 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 DCCP43146 1447 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 MCM3P25205 808 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 TTBK2Q6IQ55 1244 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 LRP10Q7Z4F1 713 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 P2RX5Q93086 422 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 PHF20Q9BVI0 1012 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 ZBED4O75132 1171 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 POTEJP0CG39 1038 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 ZHX1Q9UKY1 873 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP27XA6NNY8 438 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 NEDD1Q8NHV4 660 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 POLD4Q9HCU8 107 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 GOPCQ9HD26 462 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 PICK1Q9NRD5 415 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms