RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 IFT74Q96LB3 600 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 AKR1B1P15121 316 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 STYK1Q6J9G0 422 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 TRIML1Q8N9V2 468 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 IGDCC4Q8TDY8 1250 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 ZNF341Q9BYN7 854 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 IMPG2Q9BZV3 1241 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 PIK3C2AO00443 1686 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.033e-7■■■□□ 14.7
DDX54-202ENST00000314045 PFKFB3Q16875 520 aaPredicted RBP15.27■□□□□ 0.03
DDX54-202ENST00000314045 SKIDA1Q1XH10 827 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 EHBP1Q8NDI1 1231 aa15.27■□□□□ 0.03
DDX54-202ENST00000314045 EEF2P13639 858 aaKnown RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 GCFC2P16383 781 aaKnown RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 CLCN1P35523 988 aa15.26■□□□□ 0.03
DDX54-202ENST00000314045 UBE2SQ16763 222 aa15.26■□□□□ 0.03
DDX54-202ENST00000314045 BAG1Q99933 345 aaPredicted RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 MRPL44Q9H9J2 332 aaKnown RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 JADE2Q9NQC1 790 aa15.26■□□□□ 0.03
DDX54-202ENST00000314045 AZI2Q9H6S1 392 aa15.26■□□□□ 0.03
DDX54-202ENST00000314045 GCNT3O95395 438 aa15.26■□□□□ 0.03
DDX54-202ENST00000314045 XPO4Q9C0E2 1151 aaKnown RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 SRPRBQ9Y5M8 271 aaKnown RBP15.26■□□□□ 0.03
DDX54-202ENST00000314045 FLT1P17948 1338 aa15.26■□□□□ 0.03
DDX54-202ENST00000314045 HARSP12081 509 aaKnown RBP15.25■□□□□ 0.03
DDX54-202ENST00000314045 KRT83P78385 493 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 ZSWIM4Q9H7M6 989 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 ANKRD26Q9UPS8 1709 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 RGL2O15211 777 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 DPEP1P16444 411 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 NCBP1Q09161 790 aaKnown RBP15.25■□□□□ 0.03
DDX54-202ENST00000314045 KIF5AQ12840 1032 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 FAM160B2Q86V87 743 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 TIGD1Q96MW7 591 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 SPON1Q9HCB6 807 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.033e-11■■■■■ 371
DDX54-202ENST00000314045 POLLQ9UGP5 575 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 PAXBP1Q9Y5B6 917 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 F5H6K3 240 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 ANTXR2P58335 489 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 SNAP25P60880 206 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 KLRC3Q07444 240 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 GRM4Q14833 912 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 AK8Q96MA6 479 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 OSBPL5Q9H0X9 879 aaPredicted RBP15.25■□□□□ 0.03
DDX54-202ENST00000314045 MRVI1Q9Y6F6 885 aa15.25■□□□□ 0.03
DDX54-202ENST00000314045 SRGNP10124 158 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 HHIPL2Q6UWX4 724 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 SLIT3O75094 1523 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 TMEM87AQ8NBN3 555 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 OXER1Q8TDS5 423 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 SH3GLB2Q9NR46 395 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 KIAA1024Q9UPX6 916 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 A0A087WWV3 80 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 CALUO43852 315 aaPredicted RBP15.24■□□□□ 0.03
DDX54-202ENST00000314045 RPN1P04843 607 aaKnown RBP15.24■□□□□ 0.03
DDX54-202ENST00000314045 RAPGEF1Q13905 1077 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 AXDND1Q5T1B0 1012 aaPredicted RBP15.24■□□□□ 0.03
DDX54-202ENST00000314045 DCAF4Q8WV16 495 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 GSDMAQ96QA5 445 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX54-202ENST00000314045 LRCH2Q5VUJ6 765 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 GLG1Q92896 1179 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 DRC1Q96MC2 740 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 LZTFL1Q9NQ48 299 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 FANCLQ9NW38 375 aa15.24■□□□□ 0.03
DDX54-202ENST00000314045 GPR75-ASB3A0A0A6YYF3 556 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 ZBTB5O15062 677 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 KRT86O43790 486 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 ZNF771Q7L3S4 317 aaPredicted RBP15.23■□□□□ 0.03
DDX54-202ENST00000314045 MYOCDQ8IZQ8 938 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 KRT9P35527 623 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 PRPF4BQ13523 1007 aaKnown RBP15.23■□□□□ 0.03
DDX54-202ENST00000314045 IFI16Q16666 785 aaKnown RBP15.23■□□□□ 0.03
DDX54-202ENST00000314045 EXOC3O60645 756 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 BRDTQ58F21 947 aaPredicted RBP15.23■□□□□ 0.03
DDX54-202ENST00000314045 STAG2Q8N3U4 1231 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
DDX54-202ENST00000314045 GINS2Q9Y248 185 aa15.23■□□□□ 0.03
DDX54-202ENST00000314045 MACROD2A1Z1Q3 448 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 USP17L10C9JJH3 530 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 TMCO3Q6UWJ1 677 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 FNBP1Q96RU3 617 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 PTPREP23469 700 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 HOXA13P31271 388 aaPredicted RBP15.22■□□□□ 0.03
DDX54-202ENST00000314045 PPP4CP60510 307 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 DPCR1Q3MIW9 517 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 RCSD1Q6JBY9 416 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms