RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 LRRC41Q15345 812 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 SBK1Q52WX2 424 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 GSDMAQ96QA5 445 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 KANSL2Q9H9L4 492 aa11.21□□□□□ -0.61
SEC16A-204ENST00000313084 B4DLN1 442 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 TPM1P09493 284 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 KRT9P35527 623 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 PDE4DQ08499 809 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 NR1I3Q14994 352 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 CABP7Q86V35 215 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 TMEM139Q8IV31 216 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 ERO1AQ96HE7 468 aa11.21□□□□□ -0.62
SEC16A-204ENST00000313084 MKRN1Q9UHC7 482 aaKnown RBP11.21□□□□□ -0.62
SEC16A-204ENST00000313084 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 GYPCP04921 128 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 FGRP09769 529 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 E2F4Q16254 413 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 REXO1Q8N1G1 1221 aaKnown RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 CCDC148Q8NFR7 591 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 CDK5RAP3Q96JB5 506 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 GDF11O95390 407 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 BMP15O95972 392 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 RCAN1P53805 252 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 NONOQ15233 471 aaKnown RBP eCLIP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 CERS5Q8N5B7 392 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 ANKRD20A12PQ8NF67 263 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 CHP1Q99653 195 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 MTA3Q9BTC8 594 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 ENC1O14682 589 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 CCDC175P0C221 793 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 DNA2P51530 1060 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 USH1GQ495M9 461 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 NAALADL2Q58DX5 795 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 NT5DC1Q5TFE4 455 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 FNBP4Q8N3X1 1017 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 TRIML1Q8N9V2 468 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 DRC1Q96MC2 740 aa11.2□□□□□ -0.62
SEC16A-204ENST00000313084 CGNQ9P2M7 1197 aaKnown RBP11.2□□□□□ -0.62
SEC16A-204ENST00000313084 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-204ENST00000313084 A0A1B0GTH6 734 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-204ENST00000313084 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
SEC16A-204ENST00000313084 COPB1P53618 953 aaKnown RBP11.19□□□□□ -0.62
SEC16A-204ENST00000313084 RHBDL3P58872 404 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 CSGALNACT2Q8N6G5 542 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 SLC37A4O43826 429 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 MMP10P09238 476 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 OR52Z1P0C646 297 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 ATP2B4P23634 1241 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 MTIF2P46199 727 aaKnown RBP11.19□□□□□ -0.62
SEC16A-204ENST00000313084 GNAQP50148 359 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 STK4Q13043 487 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 MCM6Q14566 821 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 GLIS3Q8NEA6 775 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 EXOC1Q9NV70 894 aa11.19□□□□□ -0.62
SEC16A-204ENST00000313084 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-204ENST00000313084 DOCK2Q92608 1830 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
SEC16A-204ENST00000313084 ZYXQ15942 572 aaKnown RBP11.18□□□□□ -0.62
SEC16A-204ENST00000313084 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 NEK8Q86SG6 692 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-204ENST00000313084 NID2Q14112 1375 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-204ENST00000313084 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 RHOXF2BP0C7M4 288 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 TCP11X2Q5H9J9 407 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 ZNF771Q7L3S4 317 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-204ENST00000313084 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-204ENST00000313084 SPATA20Q8TB22 786 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 PSMB7Q99436 277 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 RHOXF2Q9BQY4 288 aa11.18□□□□□ -0.62
SEC16A-204ENST00000313084 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms