RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SLC38A10Q9HBR0 1119 aa25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 RAVER2Q9HCJ3 691 aaKnown RBP25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 PNMA3Q9UL41 463 aa25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 SMC3Q9UQE7 1217 aa25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 ZBTB5O15062 677 aa25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 AKAP17AQ02040 695 aaKnown RBP25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 CPXCR1Q8N123 301 aa25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 REPS2Q8NFH8 660 aa25.93■■□□□ 1.74
CCDC85B-201ENST00000312579 CEP350Q5VT06 3117 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 ZNF536O15090 1300 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 PNMA6FA0A0J9YX94 578 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 ZBED4O75132 1171 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 INTS4Q96HW7 963 aaKnown RBP25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 AGBL1Q96MI9 1066 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 PAGR1Q9BTK6 254 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 TXNRD2Q9NNW7 524 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 GJB4Q9NTQ9 266 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 BTBD7Q9P203 1132 aa25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 SEC63Q9UGP8 760 aaKnown RBP25.92■■□□□ 1.74
CCDC85B-201ENST00000312579 MYPNQ86TC9 1320 aa25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 STK36Q9NRP7 1315 aa25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 COL11A1P12107 1806 aaPredicted RBP25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 TMEM132BQ14DG7 1078 aa25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 TAF1CQ15572 869 aaPredicted RBP25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 SMCR8Q8TEV9 937 aaPredicted RBP25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 COA7Q96BR5 231 aa25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 PARK7Q99497 189 aaKnown RBP25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 CTDP1Q9Y5B0 961 aaPredicted RBP25.91■■□□□ 1.74
CCDC85B-201ENST00000312579 CNMDO75829 334 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 DEXIO95424 95 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 SCG2P13521 617 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 PFKFB3Q16875 520 aaPredicted RBP25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 USH1GQ495M9 461 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 WWC2Q6AWC2 1192 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 LBX2Q6XYB7 198 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 HEATR3Q7Z4Q2 680 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 SHISA4Q96DD7 197 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 RBPJLQ9UBG7 517 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 MYH6P13533 1939 aa25.9■■□□□ 1.74
CCDC85B-201ENST00000312579 MAP2K2P36507 400 aa25.89■■□□□ 1.74
CCDC85B-201ENST00000312579 HMGN5P82970 282 aaKnown RBP25.89■■□□□ 1.74
CCDC85B-201ENST00000312579 PLS1Q14651 629 aa25.89■■□□□ 1.74
CCDC85B-201ENST00000312579 OTUD7BQ6GQQ9 843 aa25.89■■□□□ 1.74
CCDC85B-201ENST00000312579 CHMP5Q9NZZ3 219 aa25.89■■□□□ 1.74
CCDC85B-201ENST00000312579 SMCHD1A6NHR9 2005 aa25.89■■□□□ 1.73
CCDC85B-201ENST00000312579 TYW1BQ6NUM6 668 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 FBXO11Q86XK2 927 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 FAM184AQ8NB25 1140 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 ALG1Q9BT22 464 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 VPS54Q9P1Q0 977 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 ZNF214Q9UL59 606 aaPredicted RBP25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 DDIT3P35638 169 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 Q3C1V9 767 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 ANKRD13CQ8N6S4 541 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 R3HDMLQ9H3Y0 253 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 CWC22Q9HCG8 908 aaKnown RBP25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 ZCCHC17Q9NP64 241 aaKnown RBP25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 CCPG1Q9ULG6 757 aa25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 CIZ1Q9ULV3 898 aaPredicted RBP25.88■■□□□ 1.73
CCDC85B-201ENST00000312579 A0A0G2JMZ2 1700 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 ICAM1P05362 532 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 CRHR2Q13324 411 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 AMNQ9BXJ7 453 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 CPA4Q9UI42 421 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 RIPK3Q9Y572 518 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 PCDHA1Q9Y5I3 950 aa25.87■■□□□ 1.73
CCDC85B-201ENST00000312579 STXBP3O00186 592 aa25.86■■□□□ 1.73
CCDC85B-201ENST00000312579 FDX1P10109 184 aa25.86■■□□□ 1.73
CCDC85B-201ENST00000312579 SNRNP48Q6IEG0 339 aaKnown RBP25.86■■□□□ 1.73
CCDC85B-201ENST00000312579 HOMER2Q9NSB8 354 aa25.86■■□□□ 1.73
CCDC85B-201ENST00000312579 RBM27Q9P2N5 1060 aaKnown RBP25.86■■□□□ 1.73
CCDC85B-201ENST00000312579 ADGRA2Q96PE1 1338 aa25.86■■□□□ 1.73
CCDC85B-201ENST00000312579 ALAS1P13196 640 aa25.85■■□□□ 1.73
CCDC85B-201ENST00000312579 GUCY1B3Q02153 619 aa25.85■■□□□ 1.73
CCDC85B-201ENST00000312579 MB21D1Q8N884 522 aa25.85■■□□□ 1.73
CCDC85B-201ENST00000312579 BARHL2Q9NY43 387 aa25.85■■□□□ 1.73
CCDC85B-201ENST00000312579 RABGAP1Q9Y3P9 1069 aa25.85■■□□□ 1.73
CCDC85B-201ENST00000312579 THSD7BQ9C0I4 1608 aa25.85■■□□□ 1.73
CCDC85B-201ENST00000312579 STAT3P40763 770 aa25.84■■□□□ 1.73
CCDC85B-201ENST00000312579 REM2Q8IYK8 340 aaPredicted RBP25.84■■□□□ 1.73
CCDC85B-201ENST00000312579 SPATC1LQ9H0A9 340 aa25.84■■□□□ 1.73
CCDC85B-201ENST00000312579 ZFYVE28Q9HCC9 887 aa25.84■■□□□ 1.73
CCDC85B-201ENST00000312579 KCNJ14Q9UNX9 436 aa25.84■■□□□ 1.73
CCDC85B-201ENST00000312579 ERVK-9P63128 1117 aa25.83■■□□□ 1.73
CCDC85B-201ENST00000312579 ERVK-24P63145 666 aa25.83■■□□□ 1.73
CCDC85B-201ENST00000312579 WASF1Q92558 559 aa25.83■■□□□ 1.73
CCDC85B-201ENST00000312579 TEX13BQ9BXU2 312 aa25.83■■□□□ 1.73
CCDC85B-201ENST00000312579 ATP2A1O14983 1001 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 ADAMTS3O15072 1205 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 CA12O43570 354 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 TRPA1O75762 1119 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 TBC1D8O95759 1140 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 GCLCP48506 637 aaPredicted RBP25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 OAZ1P54368 228 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 NAPAP54920 295 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 MUM1L1Q5H9M0 696 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 DNAJC5GQ8N7S2 189 aa25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 MOV10L1Q9BXT6 1211 aaKnown RBP25.83■■□□□ 1.72
CCDC85B-201ENST00000312579 RNF186Q9NXI6 227 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms