RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 CYTH2Q99418 400 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 DMGDHQ9UI17 866 aaKnown RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 ZNF711Q9Y462 761 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 EIF4A3P38919 411 aaKnown RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 PLTPP55058 493 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 DDX42Q86XP3 938 aaKnown RBP eCLIP11.95□□□□□ -0.5
GGA2-201ENST00000309859 FGD4Q96M96 766 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 TEX13AQ9BXU3 409 aaPredicted RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■□□□□ 8.3
GGA2-201ENST00000309859 PTPN22Q9Y2R2 807 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 GPAA1O43292 621 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 ALDH1L1O75891 902 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 DLGAP2Q9P1A6 1054 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 EME2A4GXA9 379 aaPredicted RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 RASSF10A6NK89 507 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 ERCC5P28715 1186 aaPredicted RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 B4GALNT2Q8NHY0 566 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 CCDC97Q96F63 343 aaPredicted RBP11.95□□□□□ -0.5
GGA2-201ENST00000309859 ADGRL1O94910 1474 aa11.95□□□□□ -0.5
GGA2-201ENST00000309859 ACEP12821 1306 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 NBPF5PQ86XG9 351 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 TEKT4Q8WW24 435 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 ARPP21Q9UBL0 812 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 SASH1O94885 1247 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 DCAF17Q5H9S7 520 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 KIAA0825Q8IV33 1275 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 HELBQ8NG08 1087 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 OSBPL9Q96SU4 736 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 FAM53CQ9NYF3 392 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 ATP2A2P16615 1042 aaKnown RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 ABCB4P21439 1286 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 ERVK-24P63145 666 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 TRAF1Q13077 416 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 UAP1Q16222 522 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 PEX26Q7Z412 305 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 CEP70Q8NHQ1 597 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 RAB3IL1Q8TBN0 382 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 M0R2C6 588 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 FGAP02671 866 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 GYPCP04921 128 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 PSMC4P43686 418 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 TUBGCP2Q9BSJ2 902 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 STMN4Q9H169 189 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 RBM12Q9NTZ6 932 aaKnown RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 MTRF1LQ9UGC7 380 aaKnown RBP11.94□□□□□ -0.5
GGA2-201ENST00000309859 UGGT1Q9NYU2 1555 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 IQSEC2Q5JU85 1478 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 ABCC10Q5T3U5 1492 aa11.94□□□□□ -0.5
GGA2-201ENST00000309859 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 GRIN1Q05586 938 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 NBPF9Q3BBW0 867 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 SLC9C1Q4G0N8 1177 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 OLFML2BQ68BL8 750 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 RASGRP2Q7LDG7 609 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 PAPOLBQ9NRJ5 636 aaKnown RBP11.93□□□□□ -0.5
GGA2-201ENST00000309859 TRAF5O00463 557 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 SUN1O94901 812 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 ATP6V1G2O95670 118 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 HNRNPCP07910 306 aaKnown RBP eCLIP11.93□□□□□ -0.51e-7■■□□□ 14.4
GGA2-201ENST00000309859 PPP2R2AP63151 447 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 TTC38Q5R3I4 469 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 LRRC59Q96AG4 307 aaKnown RBP11.93□□□□□ -0.5
GGA2-201ENST00000309859 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 TRIM37O94972 964 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 MTMR3Q13615 1198 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 USP49Q70CQ1 688 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
GGA2-201ENST00000309859 USP4Q13107 963 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 PRMT1Q99873 361 aaKnown RBP11.93□□□□□ -0.5
GGA2-201ENST00000309859 KLK7P49862 253 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 TBC1D22AQ8WUA7 517 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 STRN4Q9NRL3 753 aa11.93□□□□□ -0.5
GGA2-201ENST00000309859 PPP6R2O75170 966 aa11.92□□□□□ -0.5
GGA2-201ENST00000309859 PAPOLAP51003 745 aaKnown RBP11.92□□□□□ -0.5
GGA2-201ENST00000309859 GFPT1Q06210 699 aaPredicted RBP11.92□□□□□ -0.5
GGA2-201ENST00000309859 KLHL30Q0D2K2 578 aa11.92□□□□□ -0.5
GGA2-201ENST00000309859 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
GGA2-201ENST00000309859 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
GGA2-201ENST00000309859 ZMYM6O95789 1325 aa11.92□□□□□ -0.5
GGA2-201ENST00000309859 IGF2BP3O00425 579 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms