RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 MXRA7P84157 204 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 SND1Q7KZF4 910 aaKnown RBP eCLIP10.29□□□□□ -0.76
XCR1-201ENST00000309285 LRRC8AQ8IWT6 810 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 TDRD7Q8NHU6 1098 aaKnown RBP10.29□□□□□ -0.76
XCR1-201ENST00000309285 FAM84BQ96KN1 310 aaPredicted RBP10.29□□□□□ -0.76
XCR1-201ENST00000309285 ARPP21Q9UBL0 812 aaPredicted RBP10.29□□□□□ -0.76
XCR1-201ENST00000309285 CCDC38Q502W7 563 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 STAMQ92783 540 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
XCR1-201ENST00000309285 GPR101Q96P66 508 aaPredicted RBP10.29□□□□□ -0.76
XCR1-201ENST00000309285 PPANQ9NQ55 473 aaKnown RBP10.29□□□□□ -0.76
XCR1-201ENST00000309285 MRFAP1Q9Y605 127 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 PLEKHG2Q9H7P9 1386 aa10.29□□□□□ -0.76
XCR1-201ENST00000309285 ADAMTSL3P82987 1691 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 EIF3CLB5ME19 914 aaKnown RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 EIF3CQ99613 913 aaKnown RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 IRAK4Q9NWZ3 460 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 SUFUQ9UMX1 484 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 SPDYE3A6NKU9 549 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 SEMA3EO15041 775 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 PPFIA1Q13136 1202 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 PPP1R7Q15435 360 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 SNCBQ16143 134 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 TTC38Q5R3I4 469 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 CCDC170Q8IYT3 715 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 EPB41L4AQ9HCS5 686 aaPredicted RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 HOMER2Q9NSB8 354 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 ATP8A2Q9NTI2 1148 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 SMIM24O75264 130 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 XPO4Q9C0E2 1151 aaKnown RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 ZCCHC17Q9NP64 241 aaKnown RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 STIM2Q9P246 746 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 EIF6P56537 245 aaKnown RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 FANCCQ00597 558 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 IQUBQ8NA54 791 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 MPHOSPH6Q99547 160 aaKnown RBP10.28□□□□□ -0.76
XCR1-201ENST00000309285 CAPS2Q9BXY5 557 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 SERTAD1Q9UHV2 236 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 WDR19Q8NEZ3 1342 aa10.28□□□□□ -0.76
XCR1-201ENST00000309285 KIF28PB7ZC32 967 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 ZNF827Q17R98 1081 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 PNMA1Q8ND90 353 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 CXorf56Q9H5V9 222 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.76
XCR1-201ENST00000309285 A6NNZ2 444 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 USP17L8P0C7I0 530 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 GTF2IP78347 998 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 PRKG1Q13976 671 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 POSTNQ15063 836 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 DBN1Q16643 649 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 LONRF2Q1L5Z9 754 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 TUBB8Q3ZCM7 444 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 CCDC122Q5T0U0 273 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 VCXQ9H320 206 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 ST7Q9NRC1 585 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 PCDHA5Q9Y5H7 936 aa10.27□□□□□ -0.76
XCR1-201ENST00000309285 A0A1W2PRG0 241 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 BACH1O14867 736 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 MMP1P03956 469 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 SLC8A1P32418 973 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 PDE6BP35913 854 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 SGMS1Q86VZ5 419 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 IFT74Q96LB3 600 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 RNF26Q9BY78 433 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 TRIM6Q9C030 488 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 GINS2Q9Y248 185 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 HMGB1P1B2RPK0 211 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 STMN1P16949 149 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 ZYXQ15942 572 aaKnown RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 TSNAXIP1Q2TAA8 658 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 LONRF3Q496Y0 759 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 FAM71BQ8TC56 605 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 CACTINQ8WUQ7 758 aaKnown RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 ANAPC4Q9UJX5 808 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 NFE2L3Q9Y4A8 694 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 BAZ2BQ9UIF8 2168 aaKnown RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 AKR1B15C9JRZ8 316 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 ARHGAP6O43182 974 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 CLTAP09496 248 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 KRT13P13646 458 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 ARL1P40616 181 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 SF3B3Q15393 1217 aaKnown RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 CEP128Q6ZU80 1094 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 TRMT44Q8IYL2 757 aaKnown RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 GBP7Q8N8V2 638 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 UBLCP1Q8WVY7 318 aaPredicted RBP10.27□□□□□ -0.77
XCR1-201ENST00000309285 SEPT8Q92599 483 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 CTAGE1Q96RT6 745 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 IMPACTQ9P2X3 320 aa10.27□□□□□ -0.77
XCR1-201ENST00000309285 STK38LQ9Y2H1 464 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms