RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 VIMP08670 466 aaKnown RBP1.49□□□□□ -2.17
CEP290-201ENST00000309041 RNF4P78317 190 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 PSME1Q06323 249 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 MADCAM1Q13477 382 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 DGKZQ13574 1117 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 KCNC3Q14003 757 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 NBPF9Q3BBW0 867 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 CLEC17AQ6ZS10 378 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 B4GALNT4Q76KP1 1039 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 SLC9A9Q8IVB4 645 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 FAM178BQ8IXR5 827 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.49□□□□□ -2.17
CEP290-201ENST00000309041 KIF1BPQ96EK5 621 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 ISCA1Q9BUE6 129 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 SEMA4AQ9H3S1 761 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 ERVK-5Q9HDB9 667 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 TOPBP1Q92547 1522 aa1.49□□□□□ -2.17
CEP290-201ENST00000309041 TTC37Q6PGP7 1564 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 RGSL1A5PLK6 1076 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 MTHFD2P13995 350 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 U2AF2P26368 475 aaKnown RBP eCLIP1.48□□□□□ -2.171e-6■■■□□ 19
CEP290-201ENST00000309041 LOXP28300 417 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 GTF2E1P29083 439 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 CORO1AP31146 461 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 ALDH9A1P49189 494 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 FNTBP49356 437 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 C16orf86Q6ZW13 317 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 STXBP4Q6ZWJ1 553 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 GPIHBP1Q8IV16 184 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 OR10H5Q8NGA6 315 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP6NLQ92738 828 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 TSG101Q99816 390 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 TBCDQ9BTW9 1192 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 MKNK1Q9BUB5 465 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 TBC1D23Q9NUY8 699 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ZNF281Q9Y2X9 895 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 LMTK2Q8IWU2 1503 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 KDM2BQ8NHM5 1336 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ATP7AQ04656 1500 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L15C9J2P7 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L10C9JJH3 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L13C9JLJ4 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L12C9JPN9 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L11C9JVI0 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L21D6R901 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L18D6R9N7 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L22D6RA61 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L17D6RBQ6 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L19D6RCP7 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L20D6RJB6 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 F5H423 210 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 EXOC5O00471 708 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 TP53P04637 393 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 VCLP18206 1134 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 GRNP28799 593 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 CASP9P55211 416 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ARF3P61204 181 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 ARF1P84077 181 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 USP17L24Q0WX57 530 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 FOXO1Q12778 655 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 PRKG2Q13237 762 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ZKSCAN2Q63HK3 967 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 EGFLAMQ63HQ2 1017 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 RNF44Q7L0R7 432 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ADGRA1Q86SQ6 560 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 NLRP8Q86W28 1048 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 RBM33Q96EV2 1170 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 ZNF396Q96N95 335 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 THAP2Q9H0W7 228 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 FAM83DQ9H4H8 585 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 SLC40A1Q9NP59 571 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 TMEM160Q9NX00 188 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 FBXO10Q9UK96 956 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 NSFL1CQ9UNZ2 370 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 MRPS23Q9Y3D9 190 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 ROBO1Q9Y6N7 1651 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 RGPD3A6NKT7 1758 aaPredicted RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 RGPD4Q7Z3J3 1758 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 UBN2Q6ZU65 1347 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 DDX3XO00571 662 aaKnown RBP eCLIP1.48□□□□□ -2.17
CEP290-201ENST00000309041 ZNF185O15231 689 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 NPHP1O15259 732 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ST18O60284 1047 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 PRKAR2AP13861 404 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 IGFBP4P22692 258 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 HSPA1LP34931 641 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 P2RX3P56373 397 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 PTSQ03393 145 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 GRM1Q13255 1194 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 DSC3Q14574 896 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 RGS21Q2M5E4 152 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 CCDC144BQ3MJ40 725 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 ANKRD40Q6AI12 368 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 MZT2AQ6P582 158 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 RALYLQ86SE5 291 aaKnown RBP1.48□□□□□ -2.17
CEP290-201ENST00000309041 KIAA0825Q8IV33 1275 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 DENND6AQ8IWF6 608 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 DRC7Q8IY82 874 aa1.48□□□□□ -2.17
CEP290-201ENST00000309041 CCDC144CPQ8IYA2 1237 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms