RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 FERP16591 822 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 UAP1Q16222 522 aaPredicted RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 PTPROQ16827 1216 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 SYCE1Q8N0S2 351 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 SYNE4Q8N205 404 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 DYNLL2Q96FJ2 89 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 SLFN14P0C7P3 912 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 ADAM9Q13443 819 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 WHAMMP3Q1A5X7 153 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 BRINP3Q76B58 766 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 IKBKBO14920 756 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 TNNI1P19237 187 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 POLR2FP61218 127 aaKnown RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 SLFN12Q8IYM2 578 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 PSDA5PKW4 1024 aaPredicted RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 TOB2Q14106 344 aaPredicted RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 PLA2G4DQ86XP0 818 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 FAM178BQ8IXR5 827 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 MRPL11Q9Y3B7 192 aaKnown RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 MCTP2Q6DN12 878 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 SMAP1Q8IYB5 467 aaPredicted RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 FLAD1Q8NFF5 587 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
TMOD3-201ENST00000308580 PCDHB6Q9Y5E3 794 aa10.94□□□□□ -0.66
TMOD3-201ENST00000308580 BUB1O43683 1085 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 CCDC105Q8IYK2 499 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 GJA10Q969M2 543 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 TUBGCP2Q9BSJ2 902 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 SPATA31A3Q5VYP0 1347 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 RPGRIP1Q96KN7 1286 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 CCDC17Q96LX7 622 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 AMNQ9BXJ7 453 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 PNPLA6Q8IY17 1366 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 GPATCH4Q5T3I0 446 aaKnown RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 PIGSQ96S52 555 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 COL4A3BPQ9Y5P4 624 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 CNOT6LQ96LI5 555 aaKnown RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 FAM169AQ9Y6X4 670 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 LARP4BQ92615 738 aaKnown RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 LARSQ9P2J5 1176 aaKnown RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 SLC16A2P36021 539 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 GABPB1Q06547 395 aaPredicted RBP10.93□□□□□ -0.66
TMOD3-201ENST00000308580 CEP57Q86XR8 500 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 GLG1Q92896 1179 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
TMOD3-201ENST00000308580 KRT19P08727 400 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 FAM102BQ5T8I3 360 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 GBP6Q6ZN66 633 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 IWS1Q96ST2 819 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 SERPINB13Q9UIV8 391 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 CA8P35219 290 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 IRX3P78415 501 aaPredicted RBP10.92□□□□□ -0.66
TMOD3-201ENST00000308580 XKR9Q5GH70 373 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 CDC42BPAQ5VT25 1732 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
TMOD3-201ENST00000308580 TBCKQ8TEA7 893 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 PPEF1O14829 653 aaPredicted RBP10.92□□□□□ -0.66
TMOD3-201ENST00000308580 RUFY4Q6ZNE9 571 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 KCTD1Q719H9 257 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 SMC6Q96SB8 1091 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 AMFRQ9UKV5 643 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 HYOU1Q9Y4L1 999 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 KCNK3O14649 394 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 BBOX1O75936 387 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 MECOMQ03112 1051 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.662e-6■□□□□ 9.8
TMOD3-201ENST00000308580 BRD3Q15059 726 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 ASPRV1Q53RT3 343 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 USP17L2Q6R6M4 530 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 MAN1B1Q9UKM7 699 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 FOSP01100 380 aaPredicted RBP10.92□□□□□ -0.66
TMOD3-201ENST00000308580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMOD3-201ENST00000308580 FAM204AQ9H8W3 233 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 BCS1LQ9Y276 419 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 PRPF3O43395 683 aaKnown RBP10.92□□□□□ -0.66
TMOD3-201ENST00000308580 GPATCH11Q8N954 259 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 PPP1R13BQ96KQ4 1090 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 DBNDD1Q9H9R9 158 aa10.92□□□□□ -0.66
TMOD3-201ENST00000308580 EFCAB8A8MWE9 144 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 K7ENM7 598 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 SETDB1Q15047 1291 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 OTUD6AQ7L8S5 288 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 SAMSN1Q9NSI8 373 aaKnown RBP10.91□□□□□ -0.66
TMOD3-201ENST00000308580 NCAPD2Q15021 1401 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 LAD1O00515 517 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 CDC25BP30305 580 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 LRRC41Q15345 812 aa10.91□□□□□ -0.66
TMOD3-201ENST00000308580 DEPTORQ8TB45 409 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms