RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 LRRC37A2A6NM11 1700 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 ASTN1O14525 1302 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 DNM1LO00429 736 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 ZNF467Q7Z7K2 595 aaPredicted RBP23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 MSL3Q8N5Y2 521 aaKnown RBP23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 FAM133AQ8N9E0 248 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 ANKS1AQ92625 1134 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 ESR2Q92731 530 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 ZKSCAN3Q9BRR0 538 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 A1CFQ9NQ94 594 aaKnown RBP23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 FBXO40Q9UH90 709 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 MTMR7Q9Y216 660 aa23.36■■□□□ 1.33
PDZRN3-202ENST00000308537 SYNGAP1Q96PV0 1343 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 B4E1Z4 1266 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 KDM4AO75164 1064 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 SLC16A2P36021 539 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 SLC4A3P48751 1232 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 PTH1RQ03431 593 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 KATNBL1Q9H079 304 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 RNF146Q9NTX7 359 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 PCDH10Q9P2E7 1040 aa23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 RBM27Q9P2N5 1060 aaKnown RBP23.35■■□□□ 1.33
PDZRN3-202ENST00000308537 FRMPD2Q68DX3 1309 aaPredicted RBP23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 NT5C2P49902 561 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 ZNF543Q08ER8 600 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 CCDC96Q2M329 555 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 MUM1L1Q5H9M0 696 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 GJC2Q5T442 439 aaPredicted RBP23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 DGKHQ86XP1 1220 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 C7orf61Q8IZ16 206 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 DDX11Q96FC9 970 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 ACAD9Q9H845 621 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 HOMER2Q9NSB8 354 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 ZSWIM5Q9P217 1185 aa23.34■■□□□ 1.33
PDZRN3-202ENST00000308537 SGSM2O43147 1006 aa23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 ADCY6O43306 1168 aa23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 FXR1P51114 621 aaKnown RBP eCLIP23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 CNTN2Q02246 1040 aa23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 IKQ13123 557 aaPredicted RBP23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 IMMTQ16891 758 aaKnown RBP23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 SYDE2Q5VT97 1194 aa23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 CCDC174Q6PII3 467 aa23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 LENG1Q96BZ8 264 aaPredicted RBP23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 ISY1Q9ULR0 285 aaKnown RBP23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 CTDP1Q9Y5B0 961 aaPredicted RBP23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 TAF6LQ9Y6J9 622 aa23.33■■□□□ 1.33
PDZRN3-202ENST00000308537 SOWAHBA6NEL2 793 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 ICAM1P05362 532 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 LRRC41Q15345 812 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 TKFCQ3LXA3 575 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 SKAP1Q86WV1 359 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 ANKRD35Q8N283 1001 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 ENAHQ8N8S7 591 aaPredicted RBP23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 TRERF1Q96PN7 1200 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 GPCPD1Q9NPB8 672 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 CTNNA3Q9UI47 895 aa23.32■■□□□ 1.32
PDZRN3-202ENST00000308537 ADAMTS4O75173 837 aa23.31■■□□□ 1.32
PDZRN3-202ENST00000308537 GDF15Q99988 308 aa23.31■■□□□ 1.32
PDZRN3-202ENST00000308537 SENP6Q9GZR1 1112 aaPredicted RBP23.31■■□□□ 1.32
PDZRN3-202ENST00000308537 ZMYND8Q9ULU4 1186 aaPredicted RBP23.31■■□□□ 1.32
PDZRN3-202ENST00000308537 CYP21A2P08686 494 aa23.3■■□□□ 1.32
PDZRN3-202ENST00000308537 ALAS1P13196 640 aa23.3■■□□□ 1.32
PDZRN3-202ENST00000308537 SNX17Q15036 470 aa23.3■■□□□ 1.32
PDZRN3-202ENST00000308537 ARRDC4Q8NCT1 418 aa23.3■■□□□ 1.32
PDZRN3-202ENST00000308537 ZSCAN10Q96SZ4 725 aaPredicted RBP23.3■■□□□ 1.32
PDZRN3-202ENST00000308537 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.3■■□□□ 1.32
PDZRN3-202ENST00000308537 AKR1A1P14550 325 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 SEC23AQ15436 765 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 CYB5R4Q7L1T6 521 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 ARMCX2Q7L311 632 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 PNMA1Q8ND90 353 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 CPVLQ9H3G5 476 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 CYP39A1Q9NYL5 469 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 CCPG1Q9ULG6 757 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 DDX49Q9Y6V7 483 aaKnown RBP23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 TNKSO95271 1327 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 LTBP2Q14767 1821 aa23.29■■□□□ 1.32
PDZRN3-202ENST00000308537 PGK1P00558 417 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 SYN1P17600 705 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 STOX1Q6ZVD7 989 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 IQCA1Q86XH1 822 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 CCDC144CPQ8IYA2 1237 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 CLEC4DQ8WXI8 215 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 PURBQ96QR8 312 aaKnown RBP23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 XPNPEP3Q9NQH7 507 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 CNPY2Q9Y2B0 182 aa23.28■■□□□ 1.32
PDZRN3-202ENST00000308537 POTEB2H3BUK9 544 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 NFIBO00712 420 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 GOLGA8HP0CJ92 632 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 RARBP10826 455 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 IRX5P78411 483 aaPredicted RBP23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 ACVR2BQ13705 512 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 CCSAPQ6IQ19 270 aaPredicted RBP23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 KLHDC9Q8NEP7 349 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 KRT23Q9C075 422 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 ABHD16BQ9H3Z7 469 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 PHF24Q9UPV7 400 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 WDR19Q8NEZ3 1342 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 SYNRGQ9UMZ2 1314 aa23.27■■□□□ 1.32
PDZRN3-202ENST00000308537 ATN1P54259 1190 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms