RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GOLGA6BA6NDN3 693 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 LAD1O00515 517 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 ABCB5Q2M3G0 1257 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 TEKT3Q9BXF9 490 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 MYO1AQ9UBC5 1043 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 TMEM232C9JQI7 657 aa17.58■□□□□ 0.41
USP42-201ENST00000306177 INTS8Q75QN2 995 aaKnown RBP17.58■□□□□ 0.41
USP42-201ENST00000306177 CCDC105Q8IYK2 499 aa17.58■□□□□ 0.41
USP42-201ENST00000306177 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.41
USP42-201ENST00000306177 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.41
USP42-201ENST00000306177 LRMPQ12912 555 aa17.58■□□□□ 0.41
USP42-201ENST00000306177 GPATCH4Q5T3I0 446 aaKnown RBP17.58■□□□□ 0.41
USP42-201ENST00000306177 U2AF1L4Q8WU68 220 aaKnown RBP17.58■□□□□ 0.41
USP42-201ENST00000306177 PCDHA1Q9Y5I3 950 aa17.58■□□□□ 0.41
USP42-201ENST00000306177 P4HA1P13674 534 aa17.58■□□□□ 0.4
USP42-201ENST00000306177 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.4
USP42-201ENST00000306177 AMFRQ9UKV5 643 aa17.58■□□□□ 0.4
USP42-201ENST00000306177 AXIN2Q9Y2T1 843 aa17.58■□□□□ 0.4
USP42-201ENST00000306177 N4BP1O75113 896 aaKnown RBP17.58■□□□□ 0.4
USP42-201ENST00000306177 ASPRV1Q53RT3 343 aa17.58■□□□□ 0.4
USP42-201ENST00000306177 OSBP2Q969R2 916 aa17.58■□□□□ 0.4
USP42-201ENST00000306177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.57■□□□□ 0.4
USP42-201ENST00000306177 CD2BP2O95400 341 aaKnown RBP17.57■□□□□ 0.4
USP42-201ENST00000306177 GBP6Q6ZN66 633 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 PLA2G4DQ86XP0 818 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 H7C1W4 665 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 DYNLL1P63167 89 aaKnown RBP17.57■□□□□ 0.4
USP42-201ENST00000306177 MTMR3Q13615 1198 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 WHAMMP3Q1A5X7 153 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 B4GALNT4Q76KP1 1039 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 FAM178BQ8IXR5 827 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 CHAMP1Q96JM3 812 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 MLXIPQ9HAP2 919 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 H0YCG3 227 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 XKR9Q5GH70 373 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 FAM26FQ5R3K3 315 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 METTL14Q9HCE5 456 aaKnown RBP17.57■□□□□ 0.4
USP42-201ENST00000306177 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 K7ENM7 598 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 M0QZ92 97 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 CUL4AQ13619 759 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 PUS7LQ9H0K6 701 aaKnown RBP17.57■□□□□ 0.4
USP42-201ENST00000306177 CUEDC2Q9H467 287 aa17.57■□□□□ 0.4
USP42-201ENST00000306177 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
USP42-201ENST00000306177 BBOX1O75936 387 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 TAOK1Q7L7X3 1001 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 AMNQ9BXJ7 453 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
USP42-201ENST00000306177 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 PI4K2BQ8TCG2 481 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 NDUFAB1O14561 156 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 FYB2Q5VWT5 728 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 SPATA24Q86W54 205 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 GSDMAQ96QA5 445 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
USP42-201ENST00000306177 FEZ2Q9UHY8 353 aaPredicted RBP17.56■□□□□ 0.4
USP42-201ENST00000306177 PSMC4P43686 418 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 LIG4P49917 911 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 ZBTB8OSQ8IWT0 167 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 LRRC8AQ8IWT6 810 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 MRRFQ96E11 262 aaKnown RBP17.55■□□□□ 0.4
USP42-201ENST00000306177 DESI2Q9BSY9 194 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 PAGR1Q9BTK6 254 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 STIM2Q9P246 746 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 PRKAB2O43741 272 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 SND1Q7KZF4 910 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP42-201ENST00000306177 GABPB2Q8TAK5 448 aaPredicted RBP17.55■□□□□ 0.4
USP42-201ENST00000306177 RAB17Q9H0T7 212 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 ADAM9Q13443 819 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 LONRF2Q1L5Z9 754 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 IGSF3O75054 1194 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 TTLL1O95922 423 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 ODF2LQ9ULJ1 636 aa17.55■□□□□ 0.4
USP42-201ENST00000306177 ITIH3Q06033 890 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 HAUS4Q9H6D7 363 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 SRP68Q9UHB9 627 aaKnown RBP17.54■□□□□ 0.4
USP42-201ENST00000306177 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 PCDHA5Q9Y5H7 936 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 PPFIA1Q13136 1202 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 SLC5A4Q9NY91 659 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 PARP2Q9UGN5 583 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 HYOU1Q9Y4L1 999 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 ADGRB3O60242 1522 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 KRT27Q7Z3Y8 459 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 AK8Q96MA6 479 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
USP42-201ENST00000306177 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.54■□□□□ 0.4
USP42-201ENST00000306177 CCPG1Q9ULG6 757 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 CEP57Q86XR8 500 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 HACE1Q8IYU2 909 aa17.54■□□□□ 0.4
USP42-201ENST00000306177 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms