RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 LHX8Q68G74 356 aa18.79■□□□□ 0.6
SRGAP2C-201ENST00000304465 RCSD1Q6JBY9 416 aa18.79■□□□□ 0.6
SRGAP2C-201ENST00000304465 KCTD1Q719H9 257 aa18.79■□□□□ 0.6
SRGAP2C-201ENST00000304465 TCP11L1Q9NUJ3 509 aa18.79■□□□□ 0.6
SRGAP2C-201ENST00000304465 DIS3Q9Y2L1 958 aaKnown RBP18.79■□□□□ 0.6
SRGAP2C-201ENST00000304465 CYBAP13498 195 aa18.78■□□□□ 0.6
SRGAP2C-201ENST00000304465 NT5C2P49902 561 aa18.78■□□□□ 0.6
SRGAP2C-201ENST00000304465 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
SRGAP2C-201ENST00000304465 TM6SF1Q9BZW5 370 aa18.78■□□□□ 0.6
SRGAP2C-201ENST00000304465 PARP14Q460N5 1801 aa18.78■□□□□ 0.6
SRGAP2C-201ENST00000304465 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 TBC1D10CQ8IV04 446 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 ANKRD35Q8N283 1001 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 CHST13Q8NET6 341 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 DCAF4Q8WV16 495 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 TTC14Q96N46 770 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 RIPK3Q9Y572 518 aa18.77■□□□□ 0.6
SRGAP2C-201ENST00000304465 PLA2G6O60733 806 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 NOVP48745 357 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 ZNF792Q3KQV3 632 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 RNF20Q5VTR2 975 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 IQCA1Q86XH1 822 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 TMEM47Q9BQJ4 181 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 TINF2Q9BSI4 451 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 UPF3BQ9BZI7 483 aaKnown RBP18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 HOMER2Q9NSB8 354 aa18.77■□□□□ 0.59
SRGAP2C-201ENST00000304465 COL11A1P12107 1806 aaPredicted RBP18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 SEPT4O43236 478 aa18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 PRAMEF19Q5SWL8 479 aa18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 TRPV1Q8NER1 839 aa18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 CNPY2Q9Y2B0 182 aa18.76■□□□□ 0.59
SRGAP2C-201ENST00000304465 IGHA2P01877 340 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 CPA1P15085 419 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 NEK4P51957 841 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 ARRDC4Q8NCT1 418 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 PRR12Q9ULL5 1215 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 NEDD4P46934 1319 aa18.75■□□□□ 0.59
SRGAP2C-201ENST00000304465 KDM4AO75164 1064 aa18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 MNX1P50219 401 aaPredicted RBP18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 TKFCQ3LXA3 575 aa18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 KRT23Q9C075 422 aa18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 ACAD9Q9H845 621 aa18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 CNNM2Q9H8M5 875 aa18.74■□□□□ 0.59
SRGAP2C-201ENST00000304465 FRMPD2Q68DX3 1309 aaPredicted RBP18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 KBTBD13C9JR72 458 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 ALAS1P13196 640 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 BECN1Q14457 450 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 ANO1Q5XXA6 986 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 C7orf61Q8IZ16 206 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 AGBL1Q96MI9 1066 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 ZKSCAN3Q9BRR0 538 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 GPCPD1Q9NPB8 672 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 RNF146Q9NTX7 359 aa18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 COLQQ9Y215 455 aaPredicted RBP18.73■□□□□ 0.59
SRGAP2C-201ENST00000304465 B4E1Z4 1266 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 DNM1LO00429 736 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 RARBP10826 455 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 CASTP20810 708 aaKnown RBP18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 KRT32Q14532 448 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 CHRDL2Q6WN34 429 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 RUFY3Q7L099 469 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 RASGRP2Q7LDG7 609 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 DGKHQ86XP1 1220 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 IL27Q8NEV9 243 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 TRERF1Q96PN7 1200 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 CCPG1Q9ULG6 757 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 PFASO15067 1338 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 SYNGAP1Q96PV0 1343 aa18.72■□□□□ 0.59
SRGAP2C-201ENST00000304465 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 E7EWF7 191 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 COL6A1P12109 1028 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 SLC16A2P36021 539 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 SNAP25P60880 206 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 KAT14Q9H8E8 782 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 ZNF536O15090 1300 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 POTEB2H3BUK9 544 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 ST18O60284 1047 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 PDHBP11177 359 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 AKR1A1P14550 325 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 TRDNQ13061 729 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 GJC2Q5T442 439 aaPredicted RBP18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 BTNL9Q6UXG8 535 aa18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 ZNF467Q7Z7K2 595 aaPredicted RBP18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 ZSCAN10Q96SZ4 725 aaPredicted RBP18.71■□□□□ 0.59
SRGAP2C-201ENST00000304465 K7ELQ4 463 aaPredicted RBP18.7■□□□□ 0.58
SRGAP2C-201ENST00000304465 ICAM1P05362 532 aa18.7■□□□□ 0.58
SRGAP2C-201ENST00000304465 RPS6KB1P23443 525 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms