RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 RSPH10BP0C881 870 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 PCK1P35558 622 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 CCT6AP40227 531 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 CEBPZQ03701 1054 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 STRN3Q13033 797 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SYN2Q92777 582 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ALKBH8Q96BT7 664 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 C19orf44Q9H6X5 657 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 AFG3L2Q9Y4W6 797 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SAMM50Q9Y512 469 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SLIT1O75093 1534 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 CALUO43852 315 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 BCRP11274 1271 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 IL9RQ01113 521 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 DNM1Q05193 864 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 NONOQ15233 471 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 LIN9Q5TKA1 542 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SYT10Q6XYQ8 523 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ZNF662Q6ZS27 426 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 GSTA5Q7RTV2 222 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 CKAP2LQ8IYA6 745 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 RPGRQ92834 1020 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 MAP4K1Q92918 833 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 DEPDC5O75140 1603 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 GOLGA8TH3BQL2 631 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SNUPNO95149 360 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 GOLGA8HP0CJ92 632 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 DDIT3P35638 169 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 POSTNQ15063 836 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ELF2Q15723 593 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SLC4A8Q2Y0W8 1093 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 CENPUQ71F23 418 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 TMEM63CQ9P1W3 806 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ZNF148Q9UQR1 794 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 O00370 1275 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ZRANB2O95218 330 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 KIF11P52732 1056 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 PPP1R18Q6NYC8 613 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ABTB2Q8N961 1025 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 MCUR1Q96AQ8 359 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 SH2D4AQ9H788 454 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 RWDD2AQ9UIY3 292 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 TTI1O43156 1089 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ATP2C2O75185 946 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 KRT5P13647 590 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ARHGAP4P98171 946 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 CCDC184Q52MB2 194 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 PTPRUQ92729 1446 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 EFCAB14O75071 495 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 ZNF202O95125 648 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 UBE3CQ15386 1083 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 RPS6KA1Q15418 735 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 DBN1Q16643 649 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TMCO4Q5TGY1 634 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 AGBL2Q5U5Z8 902 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 RRAGBQ5VZM2 374 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TEX11Q8IYF3 940 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 EXOC8Q8IYI6 725 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 NRBF2Q96F24 287 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TRIM4Q9C037 500 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 NACA2Q9H009 215 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 IQSEC2Q5JU85 1478 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 SMIM24O75264 130 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 ESRRGP62508 458 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TRIM60Q495X7 471 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TMEM67Q5HYA8 995 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TUBA8Q9NY65 449 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-201ENST00000303395 INTUQ9ULD6 942 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 ZNF449Q6P9G9 518 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TEKT2Q9UIF3 430 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 SYNGAP1Q96PV0 1343 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 FAM187AA6NFU0 413 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 IFIT3O14879 490 aaKnown RBP5.73□□□□□ -1.49
SCN1A-201ENST00000303395 CETN3O15182 167 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 PHACTR2O75167 634 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 PASD1Q8IV76 773 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 RHOT2Q8IXI1 618 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 IFNL2Q8IZJ0 200 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 NECTIN2Q92692 538 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 DONSONQ9NYP3 566 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 EXOC6BQ9Y2D4 811 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 POTEB3A0JP26 581 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 KRT16P08779 473 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 CCND1P24385 295 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 SNRPFP62306 86 aaKnown RBP5.73□□□□□ -1.49
SCN1A-201ENST00000303395 FIGNQ5HY92 759 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 POTEBQ6S5H4 581 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 SRLQ86TD4 932 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 RASEFQ8IZ41 740 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-201ENST00000303395 IFT81Q8WYA0 676 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 TTC1Q99614 292 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 NFE2L3Q9Y4A8 694 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 GOLGA8JA6NMD2 632 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 SPAG6O75602 509 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 HSPA9P38646 679 aaKnown RBP5.73□□□□□ -1.49
SCN1A-201ENST00000303395 IGBP1P78318 339 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 DIXDC1Q155Q3 683 aa5.73□□□□□ -1.49
SCN1A-201ENST00000303395 LRRC23Q53EV4 343 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms