RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 BBS5Q8N3I7 341 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 IFIH1Q9BYX4 1025 aaKnown RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 NBNO60934 754 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 THOC5Q13769 683 aaKnown RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 HS1BP3Q53T59 392 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 LARGE2Q8N3Y3 721 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 PHF8Q9UPP1 1060 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.087e-7■■■■□ 22
HIPK3-201ENST00000303296 TLR3O15455 904 aaKnown RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 TOM1L1O75674 476 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 SRGAP2BP0DMP2 458 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 PMLP29590 882 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 TRIM67Q6ZTA4 783 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 IFNLR1Q8IU57 520 aaPredicted RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 TTC25Q96NG3 672 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 PRDM5Q9NQX1 630 aaPredicted RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 LARSQ9P2J5 1176 aaKnown RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 AK2P54819 239 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 SPATS2Q86XZ4 545 aaKnown RBP15.53■□□□□ 0.08
HIPK3-201ENST00000303296 RTEL1Q9NZ71 1219 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 ZKSCAN5Q9Y2L8 839 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 KIF17Q9P2E2 1029 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 PPP1R2P41236 205 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 SKIV2LQ15477 1246 aaKnown RBP15.53■□□□□ 0.08
HIPK3-201ENST00000303296 TEX9Q8N6V9 391 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 CSADQ9Y600 493 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 RNF113AO15541 343 aaKnown RBP15.53■□□□□ 0.08
HIPK3-201ENST00000303296 IFNAR2P48551 515 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 CREB3L3Q68CJ9 461 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 ESYT1Q9BSJ8 1104 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 SLC8A2Q9UPR5 921 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
HIPK3-201ENST00000303296 OCRLQ01968 901 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 C16orf87Q6PH81 154 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 RNF207Q6ZRF8 634 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 NCAPG2Q86XI2 1143 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 PHACTR3Q96KR7 559 aa15.53■□□□□ 0.08
HIPK3-201ENST00000303296 WDR91A4D1P6 747 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 PDE6CP51160 858 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 ATG16L1Q676U5 607 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 CFAP36Q96G28 342 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 ARMT1Q9H993 441 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 E9PMD0 336 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 MECOMQ03112 1051 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 MTX1Q13505 466 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 SF3B3Q15393 1217 aaKnown RBP15.52■□□□□ 0.08
HIPK3-201ENST00000303296 ZBTB8OSQ8IWT0 167 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.08
HIPK3-201ENST00000303296 GNPATO15228 680 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 GAS7O60861 476 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 ZNF18P17022 549 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 KHDRBS2Q5VWX1 349 aaKnown RBP15.52■□□□□ 0.08
HIPK3-201ENST00000303296 SPATS2LQ9NUQ6 558 aaKnown RBP15.52■□□□□ 0.08
HIPK3-201ENST00000303296 ANGPT1Q15389 498 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 GCNAQ96QF7 691 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 SLC38A10Q9HBR0 1119 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
HIPK3-201ENST00000303296 E2F6O75461 281 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 PTPREP23469 700 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 GRAMD4Q6IC98 578 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.52■□□□□ 0.07
HIPK3-201ENST00000303296 ERO1AQ96HE7 468 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 EFHD1Q9BUP0 239 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 HOMER3Q9NSC5 361 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 TYW1Q9NV66 732 aaKnown RBP15.52■□□□□ 0.07
HIPK3-201ENST00000303296 AKT3Q9Y243 479 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 IFNA8P32881 189 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 IL15P40933 162 aaPredicted RBP15.52■□□□□ 0.07
HIPK3-201ENST00000303296 STAT1P42224 750 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 TFCP2Q12800 502 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 DDB1Q16531 1140 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 FRA10AC1Q70Z53 315 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 TXLNGQ9NUQ3 528 aa15.52■□□□□ 0.07
HIPK3-201ENST00000303296 LRRIQ4A6NIV6 560 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 ORC4O43929 436 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 ANKRD2Q9GZV1 360 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 MAP3K7O43318 606 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 CARSP49589 748 aaKnown RBP15.51■□□□□ 0.07
HIPK3-201ENST00000303296 CCDC24Q8N4L8 307 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 EPAS1Q99814 870 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 A6NNZ2 444 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 SKIP12755 728 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 LLGL1Q15334 1064 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 TUBB8Q3ZCM7 444 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 BBOF1Q8ND07 529 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 CEP70Q8NHQ1 597 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 CACTINQ8WUQ7 758 aaKnown RBP15.51■□□□□ 0.07
HIPK3-201ENST00000303296 CYTH2Q99418 400 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 TEX12Q9BXU0 123 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 LUC7L3O95232 432 aaKnown RBP15.51■□□□□ 0.07
HIPK3-201ENST00000303296 DYNLT1P63172 113 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 E2F5Q15329 346 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 SNCBQ16143 134 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 DDX42Q86XP3 938 aaKnown RBP eCLIP15.51■□□□□ 0.07
HIPK3-201ENST00000303296 CCDC90BQ9GZT6 254 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
HIPK3-201ENST00000303296 SH3BGRP55822 239 aaPredicted RBP15.51■□□□□ 0.07
HIPK3-201ENST00000303296 FANCCQ00597 558 aa15.51■□□□□ 0.07
HIPK3-201ENST00000303296 ZKSCAN8Q15776 578 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms