RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
SDC2-201ENST00000302190 KIAA0754O94854 1291 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 ZNF772Q68DY9 489 aaPredicted RBP15.7■□□□□ 0.1
SDC2-201ENST00000302190 TPTE2Q6XPS3 522 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 RAB34Q9BZG1 259 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 HDAC6Q9UBN7 1215 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 AFDNP55196 1824 aaKnown RBP15.7■□□□□ 0.1
SDC2-201ENST00000302190 KRT31Q15323 416 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 TEX11Q8IYF3 940 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 FAN1Q9Y2M0 1017 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 ATRNO75882 1429 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 TULP2O00295 520 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 BUB1O43683 1085 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 LRRC41Q15345 812 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 RRAGAQ7L523 313 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 CABP7Q86V35 215 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 GSPT2Q8IYD1 628 aaKnown RBP15.7■□□□□ 0.1
SDC2-201ENST00000302190 RNF26Q9BY78 433 aaPredicted RBP15.7■□□□□ 0.1
SDC2-201ENST00000302190 PDGFDQ9GZP0 370 aaPredicted RBP15.7■□□□□ 0.1
SDC2-201ENST00000302190 C6orf50Q9HD87 102 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 CDC23Q9UJX2 597 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 MYO6Q9UM54 1294 aa15.7■□□□□ 0.1
SDC2-201ENST00000302190 SETQ01105 290 aaPredicted RBP15.69■□□□□ 0.1
SDC2-201ENST00000302190 RAPGEF1Q13905 1077 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 NCAPHQ15003 741 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 SND1Q7KZF4 910 aaKnown RBP eCLIP15.69■□□□□ 0.17e-11■■■□□ 17
SDC2-201ENST00000302190 SRGAP1Q7Z6B7 1085 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 PHLPP2Q6ZVD8 1323 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 TRIM10Q9UDY6 481 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 ST5P78524 1137 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
SDC2-201ENST00000302190 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 RRP36Q96EU6 259 aaKnown RBP15.69■□□□□ 0.1
SDC2-201ENST00000302190 ABCB6Q9NP58 842 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.69■□□□□ 0.11e-15■■■■■ 125
SDC2-201ENST00000302190 SAR1BQ9Y6B6 198 aa15.69■□□□□ 0.1
SDC2-201ENST00000302190 PLS1Q14651 629 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 HPS3Q969F9 1004 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 FBXO2Q9UK22 296 aaPredicted RBP15.68■□□□□ 0.1
SDC2-201ENST00000302190 SMCO2A6NFE2 343 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 PARP1P09874 1014 aaKnown RBP15.68■□□□□ 0.1
SDC2-201ENST00000302190 GNAQP50148 359 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 RABGGTAQ92696 567 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
SDC2-201ENST00000302190 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 KLRF2D3W0D1 207 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 LDHCP07864 332 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 FXR1P51114 621 aaKnown RBP eCLIP15.67■□□□□ 0.1
SDC2-201ENST00000302190 UBR2Q8IWV8 1755 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 LRRC47Q8N1G4 583 aaKnown RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 GSDMAQ96QA5 445 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 PYM1Q9BRP8 204 aaKnown RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 ERCC5P28715 1186 aaPredicted RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 DCAF17Q5H9S7 520 aaPredicted RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 MICALL1Q8N3F8 863 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 ATRIPQ8WXE1 791 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 CHP1Q99653 195 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 ONECUT3O60422 494 aaPredicted RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 TRAPPC3LQ5T215 181 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 CC2D1AQ6P1N0 951 aaPredicted RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 RAD9BQ6WBX8 426 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 TRIML1Q8N9V2 468 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 SNX29Q8TEQ0 813 aa15.67■□□□□ 0.1
SDC2-201ENST00000302190 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.67■□□□□ 0.1
SDC2-201ENST00000302190 SMIM23A6NLE4 172 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 MAGEA1P43355 309 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 CKAP4Q07065 602 aaKnown RBP15.66■□□□□ 0.1
SDC2-201ENST00000302190 SV2BQ7L1I2 683 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 TC2NQ8N9U0 490 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 TUBGCP2Q9BSJ2 902 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 KANSL2Q9H9L4 492 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 TADA3O75528 432 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 PTPAQ15257 358 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 EHBP1Q8NDI1 1231 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 WNK3Q9BYP7 1800 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 UFL1O94874 794 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 HPDP32754 393 aaPredicted RBP15.66■□□□□ 0.1
SDC2-201ENST00000302190 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDC2-201ENST00000302190 IFIH1Q9BYX4 1025 aaKnown RBP15.66■□□□□ 0.1
SDC2-201ENST00000302190 BRWD3Q6RI45 1802 aa15.66■□□□□ 0.1
SDC2-201ENST00000302190 A0A0U1RQJ8 604 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
SDC2-201ENST00000302190 MFAP3LO75121 409 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 TOB1P50616 345 aaPredicted RBP15.65■□□□□ 0.1
SDC2-201ENST00000302190 MECOMQ03112 1051 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 KLHL7Q8IXQ5 586 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
SDC2-201ENST00000302190 TRIM31Q9BZY9 425 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 ADGRG1Q9Y653 693 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 SLC7A5Q01650 507 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms