RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 SPA17Q15506 151 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 TXNRD1Q16881 649 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 KRT26Q7Z3Y9 468 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 TMEM47Q9BQJ4 181 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 ANKRD2Q9GZV1 360 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 EPN1Q9Y6I3 576 aaPredicted RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 UBE2SQ16763 222 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 CYP26C1Q6V0L0 522 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 BRIP1Q9BX63 1249 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 L2HGDHQ9H9P8 463 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
PCSK9-201ENST00000302118 ERLIN1O75477 346 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 DDAH1O94760 285 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 TCP11X2Q5H9J9 407 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 NYXQ9GZU5 481 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 CENPHQ9H3R5 247 aa13.68□□□□□ -0.22
PCSK9-201ENST00000302118 A0A1B0GTH6 734 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 POTEMA6NI47 508 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 ZNF18P17022 549 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 ATP2C1P98194 919 aaPredicted RBP13.67□□□□□ -0.22
PCSK9-201ENST00000302118 SPAG1Q07617 926 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 IL17AQ16552 155 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 CCDC40Q4G0X9 1142 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
PCSK9-201ENST00000302118 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
PCSK9-201ENST00000302118 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 OR8K1Q8NGG5 319 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 LRWD1Q9UFC0 647 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 LDHCP07864 332 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.225e-7■■□□□ 12.9
PCSK9-201ENST00000302118 KCTD1Q719H9 257 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.228e-10■□□□□ 9.5
PCSK9-201ENST00000302118 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
PCSK9-201ENST00000302118 ABHD10Q9NUJ1 306 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 KCPQ6ZWJ8 1503 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 COL18A1P39060 1754 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 ERVK-24P63145 666 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 GABPB1Q06547 395 aaPredicted RBP13.66□□□□□ -0.22
PCSK9-201ENST00000302118 CC2D1AQ6P1N0 951 aaPredicted RBP13.66□□□□□ -0.22
PCSK9-201ENST00000302118 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
PCSK9-201ENST00000302118 GPR161Q8N6U8 529 aaKnown RBP13.66□□□□□ -0.22
PCSK9-201ENST00000302118 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 FHOD1Q9Y613 1164 aa13.66□□□□□ -0.22
PCSK9-201ENST00000302118 PLA2G4AP47712 749 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 MTRQ99707 1265 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 ABCB6Q9NP58 842 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 IL17RBQ9NRM6 502 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 CDC23Q9UJX2 597 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 MRFAP1Q9Y605 127 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 BUB1O43683 1085 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 CAPN2P17655 700 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
PCSK9-201ENST00000302118 GNAQP50148 359 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 STK4Q13043 487 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 PPP2R5BQ15173 497 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
PCSK9-201ENST00000302118 TMEM139Q8IV31 216 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 REXO1Q8N1G1 1221 aaKnown RBP13.65□□□□□ -0.22
PCSK9-201ENST00000302118 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
PCSK9-201ENST00000302118 JAKMIP2Q96AA8 810 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
PCSK9-201ENST00000302118 SMARCAL1Q9NZC9 954 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 USP21Q9UK80 565 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 ZNF185O15231 689 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 SASH3O75995 380 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 CEP112Q8N8E3 955 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
PCSK9-201ENST00000302118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.65□□□□□ -0.221e-6■■■■■ 29.1
PCSK9-201ENST00000302118 TNS2Q63HR2 1409 aa13.65□□□□□ -0.23
PCSK9-201ENST00000302118 TRAF5O00463 557 aa13.64□□□□□ -0.23
PCSK9-201ENST00000302118 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms