RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 RRP36Q96EU6 259 aaKnown RBP24.8■■□□□ 1.56
TPM4-201ENST00000300933 SYT10Q6XYQ8 523 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 PDGFDQ9GZP0 370 aaPredicted RBP24.8■■□□□ 1.56
TPM4-201ENST00000300933 FAM53CQ9NYF3 392 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 LTBP1Q14766 1721 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 IRX5P78411 483 aaPredicted RBP24.79■■□□□ 1.56
TPM4-201ENST00000300933 IQUBQ8NA54 791 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 TEKT1Q969V4 418 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 CCDC148Q8NFR7 591 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 SEC63Q9UGP8 760 aaKnown RBP24.79■■□□□ 1.56
TPM4-201ENST00000300933 CCNT1O60563 726 aaKnown RBP24.79■■□□□ 1.56
TPM4-201ENST00000300933 CRKP46108 304 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 GSDMDP57764 484 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 CREBRFQ8IUR6 639 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 SPZ1Q9BXG8 430 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 IMPACTQ9P2X3 320 aa24.79■■□□□ 1.56
TPM4-201ENST00000300933 SHMT1P34896 483 aa24.78■■□□□ 1.56
TPM4-201ENST00000300933 MAPK8IP2Q13387 824 aaPredicted RBP24.78■■□□□ 1.56
TPM4-201ENST00000300933 PDXDC2PQ6P474 469 aa24.78■■□□□ 1.56
TPM4-201ENST00000300933 DTHD1Q6ZMT9 781 aa24.78■■□□□ 1.56
TPM4-201ENST00000300933 TRERF1Q96PN7 1200 aa24.78■■□□□ 1.56
TPM4-201ENST00000300933 UIMC1Q96RL1 719 aa24.78■■□□□ 1.56
TPM4-201ENST00000300933 E4F1Q66K89 784 aaPredicted RBP24.77■■□□□ 1.56
TPM4-201ENST00000300933 KCTD1Q719H9 257 aa24.77■■□□□ 1.56
TPM4-201ENST00000300933 ZSCAN29Q8IWY8 852 aaPredicted RBP24.77■■□□□ 1.56
TPM4-201ENST00000300933 ZMYND12Q9H0C1 365 aa24.77■■□□□ 1.56
TPM4-201ENST00000300933 AOC3Q16853 763 aa24.77■■□□□ 1.56
TPM4-201ENST00000300933 ENOX1Q8TC92 643 aaKnown RBP24.77■■□□□ 1.56
TPM4-201ENST00000300933 H0YIN7 160 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 ZNF18P17022 549 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 STAT6P42226 847 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 SOGA3Q5TF21 947 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 VSTM4Q8IW00 320 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 LRRC15Q8TF66 581 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 LRRC37AA6NMS7 1700 aa24.76■■□□□ 1.55
TPM4-201ENST00000300933 COL11A2P13942 1736 aaPredicted RBP24.75■■□□□ 1.55
TPM4-201ENST00000300933 DDTLA6NHG4 134 aaPredicted RBP24.75■■□□□ 1.55
TPM4-201ENST00000300933 PPP1R3GB7ZBB8 358 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 EN1Q05925 392 aaPredicted RBP24.75■■□□□ 1.55
TPM4-201ENST00000300933 ZNF772Q68DY9 489 aaPredicted RBP24.75■■□□□ 1.55
TPM4-201ENST00000300933 TRIML1Q8N9V2 468 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 PPP1R13BQ96KQ4 1090 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 LZTS2Q9BRK4 669 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 CTNND2Q9UQB3 1225 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 ECE2O60344 883 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 EZH2Q15910 746 aaKnown RBP24.75■■□□□ 1.55
TPM4-201ENST00000300933 TBCKQ8TEA7 893 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 CCDC34Q96HJ3 373 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 DACH1Q9UI36 760 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 GDAQ9Y2T3 454 aa24.75■■□□□ 1.55
TPM4-201ENST00000300933 TEX33O43247 280 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 CLCN6P51797 869 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 ADKP55263 362 aaKnown RBP24.74■■□□□ 1.55
TPM4-201ENST00000300933 BMS1Q14692 1282 aaKnown RBP24.74■■□□□ 1.55
TPM4-201ENST00000300933 RRAGBQ5VZM2 374 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 DNAJC18Q9H819 358 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 CBFA2T2O43439 604 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 RXRBP28702 533 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 DHX8Q14562 1220 aaKnown RBP24.74■■□□□ 1.55
TPM4-201ENST00000300933 C6orf50Q9HD87 102 aa24.74■■□□□ 1.55
TPM4-201ENST00000300933 LONP1P36776 959 aaKnown RBP24.73■■□□□ 1.55
TPM4-201ENST00000300933 ARHGAP29Q52LW3 1261 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 NAALADL2Q58DX5 795 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 ARL6IP4Q66PJ3 421 aaKnown RBP24.73■■□□□ 1.55
TPM4-201ENST00000300933 GSDMAQ96QA5 445 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 TTLL1O95922 423 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 UBA7P41226 1012 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 TECP42680 631 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 CCDC96Q2M329 555 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 DAGLBQ8NCG7 672 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 CCDC150Q8NCX0 1101 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 FHOD1Q9Y613 1164 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 SYNRGQ9UMZ2 1314 aa24.73■■□□□ 1.55
TPM4-201ENST00000300933 H2AFXP16104 143 aaPredicted RBP24.72■■□□□ 1.55
TPM4-201ENST00000300933 NONOQ15233 471 aaKnown RBP eCLIP24.72■■□□□ 1.552e-8■■■■■ 32.1
TPM4-201ENST00000300933 EEF2KMTQ96G04 330 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 DISC1Q9NRI5 854 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 SUGT1Q9Y2Z0 365 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 UBE2SQ16763 222 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 HHIPL2Q6UWX4 724 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 PODNQ7Z5L7 613 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 ADGRF4Q8IZF3 695 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 GJA10Q969M2 543 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 RIOX1Q9H6W3 641 aa24.72■■□□□ 1.55
TPM4-201ENST00000300933 SLX4Q8IY92 1834 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 FLAD1Q8NFF5 587 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 KIF2AO00139 706 aaPredicted RBP24.71■■□□□ 1.55
TPM4-201ENST00000300933 PPP1R11O60927 126 aaPredicted RBP24.71■■□□□ 1.55
TPM4-201ENST00000300933 TXLNAP40222 546 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 NOVP48745 357 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 POTEDQ86YR6 584 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 REXO1Q8N1G1 1221 aaKnown RBP24.71■■□□□ 1.55
TPM4-201ENST00000300933 CPLX3Q8WVH0 158 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 SCN9AQ15858 1988 aa24.71■■□□□ 1.55
TPM4-201ENST00000300933 IGKV6D-41A0A0C4DH26 115 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 USP17L10C9JJH3 530 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 HLA-DOAP06340 250 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 ERCC5P28715 1186 aaPredicted RBP24.7■■□□□ 1.55
TPM4-201ENST00000300933 GNA11P29992 359 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 NT5C2P49902 561 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms