RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 YIPF3Q9GZM5 350 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 DPH5Q9H2P9 285 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 PAX7P23759 505 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 SEPT7Q16181 437 aaKnown RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 HOOK3Q86VS8 718 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 OSBPL9Q96SU4 736 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 USP6P35125 1406 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 RTL9Q8NET4 1388 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 SLC5A1P13866 664 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 MDH1P40925 334 aaKnown RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 MSL3Q8N5Y2 521 aaKnown RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 ATP6V1G3Q96LB4 118 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 PPP1R12AO14974 1030 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 FANCGO15287 622 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 ZFYVE27Q5T4F4 411 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 CYB5R4Q7L1T6 521 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 DAAM2Q86T65 1068 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 SNX12Q9UMY4 172 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 PCDHA13Q9Y5I0 950 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 CPS1P31327 1500 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 MROH2AA6NES4 1674 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 ENO4A6NNW6 628 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 LGALS16A8MUM7 142 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 CUL4BQ13620 913 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 UHMK1Q8TAS1 419 aaKnown RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 HPS5Q9UPZ3 1129 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 UTP11Q9Y3A2 253 aaKnown RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 ABL1P00519 1130 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 CYP7A1P22680 504 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 KIF11P52732 1056 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 SMTNP53814 917 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 IRX1P78414 480 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
ERCC1-202ENST00000300853 WHAMMQ8TF30 809 aa13.11□□□□□ -0.31
ERCC1-202ENST00000300853 SKAP2O75563 359 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-202ENST00000300853 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 CD2APQ9Y5K6 639 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 RFX7Q2KHR2 1363 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 HIP1RO75146 1068 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 BMP6P22004 513 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 CALML3P27482 149 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 MXRA7P84157 204 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 PTGISQ16647 500 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 SGSM3Q96HU1 749 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 STMN4Q9H169 189 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-202ENST00000300853 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 RGS16O15492 202 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-202ENST00000300853 SMIM24O75264 130 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 PDHBP11177 359 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-202ENST00000300853 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
ERCC1-202ENST00000300853 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
ERCC1-202ENST00000300853 TRAF5O00463 557 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 PRCPP42785 496 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 CAPRIN2Q6IMN6 1127 aaKnown RBP13.09□□□□□ -0.31
ERCC1-202ENST00000300853 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 TRIM7Q9C029 511 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 NOP53Q9NZM5 478 aaKnown RBP13.09□□□□□ -0.31
ERCC1-202ENST00000300853 EHD2Q9NZN4 543 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 KRIT1O00522 736 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 A1BGP04217 495 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 CD44P16070 742 aaKnown RBP13.09□□□□□ -0.31
ERCC1-202ENST00000300853 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 ANTXR2P58335 489 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 KLHL30Q0D2K2 578 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 CRYMQ14894 314 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
ERCC1-202ENST00000300853 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 CYFIP2Q96F07 1278 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 FAM167BQ9BTA0 163 aa13.09□□□□□ -0.31
ERCC1-202ENST00000300853 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms