RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 KIF23Q02241 960 aaPredicted RBP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 RASA3Q14644 834 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 KCTD1Q719H9 257 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 DPF2Q92785 391 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 TIGD1Q96MW7 591 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 LRRC4BQ9NT99 713 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 POLR2DO15514 142 aaKnown RBP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 PHACTR2O75167 634 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 GNA14O95837 355 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 MIGA2Q7L4E1 593 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 FAM83AQ86UY5 434 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 CETN3O15182 167 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 CYP2D6P10635 497 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 SEPT2Q15019 361 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 POSTNQ15063 836 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 PRR16Q569H4 304 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 DPP9Q86TI2 863 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 CEP95Q96GE4 821 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 SPAG5Q96R06 1193 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 PHLPP2Q6ZVD8 1323 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 NHSL1Q5SYE7 1610 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 ZEB2O60315 1214 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 CTNND1O60716 968 aaKnown RBP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 EEF2P13639 858 aaKnown RBP9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
SNRPD1-201ENST00000300413 LRP6O75581 1613 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 CHMP2AO43633 222 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 ERLIN2O94905 339 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 CYLC1P35663 651 aaPredicted RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 EXOSC10Q01780 885 aaKnown RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 CCDC181Q5TID7 509 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 MB21D1Q8N884 522 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 MSANTD4Q8NCY6 345 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 PCDHB13Q9Y5F0 798 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 ZHX2Q9Y6X8 837 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 SALL3Q9BXA9 1300 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 NLRP12P59046 1061 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 MAP3K9P80192 1104 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 TOB2Q14106 344 aaPredicted RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 TDRD12Q587J7 1177 aaKnown RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 SPICE1Q8N0Z3 855 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 MTMR4Q9NYA4 1195 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 ZBTB21Q9ULJ3 1066 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 ANKRD62A6NC57 917 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 F5H6K3 240 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 KLRC3Q07444 240 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 SAMD3Q8N6K7 520 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 NEK9Q8TD19 979 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 ABT1Q9ULW3 272 aaKnown RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 SLC26A4O43511 780 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 KIF5CO60282 957 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 VWA3BQ502W6 1294 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 LARSQ9P2J5 1176 aaKnown RBP9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 COL4A3BPQ9Y5P4 624 aa9.28□□□□□ -0.92
SNRPD1-201ENST00000300413 hCG_1642624A0A1W2PR95 340 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 TMOD1P28289 359 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 CACNB3P54284 484 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 CYB5R4Q7L1T6 521 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 AOPEPQ8N6M6 819 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 GLG1Q92896 1179 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 SYNPO2Q9UMS6 1093 aa9.27□□□□□ -0.92
SNRPD1-201ENST00000300413 GAP43P17677 238 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 PAK1Q13153 545 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 TMC6Q7Z403 805 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 ZSCAN30Q86W11 494 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 ZBTB8OSQ8IWT0 167 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 MAP7D2Q96T17 732 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 DNAJC25Q9H1X3 360 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 TTC12Q9H892 705 aaPredicted RBP9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 RCOR1Q9UKL0 485 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 HERC4Q5GLZ8 1057 aaPredicted RBP9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 LRCH2Q5VUJ6 765 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 MIS18BP1Q6P0N0 1132 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 TMEM87AQ8NBN3 555 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 KCNB2Q92953 911 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 LTBP4Q8N2S1 1624 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 ADCY5O95622 1261 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 PRPHP41219 470 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 SP4Q02446 784 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 PTGDRQ13258 359 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 LRP10Q7Z4F1 713 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 ANO3Q9BYT9 981 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 AP5M1Q9H0R1 490 aa9.27□□□□□ -0.93
SNRPD1-201ENST00000300413 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms