RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 SMARCC1Q92922 1105 aaPredicted RBP11.41□□□□□ -0.58
CCDC36-201ENST00000296449 CRACR2AQ9BSW2 395 aa11.41□□□□□ -0.58
CCDC36-201ENST00000296449 DISC1Q9NRI5 854 aa11.41□□□□□ -0.58
CCDC36-201ENST00000296449 DUSP10Q9Y6W6 482 aa11.41□□□□□ -0.58
CCDC36-201ENST00000296449 ANO9A1A5B4 782 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 KLRC4O43908 158 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 SHOX2O60902 331 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 CYLC1P35663 651 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 SUSD4Q5VX71 490 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 TTI2Q6NXR4 508 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 CAGE1Q8TC20 777 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 PPM1EQ8WY54 764 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 BRIP1Q9BX63 1249 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 NHEJ1Q9H9Q4 299 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 NMT2O60551 498 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 KLK7P49862 253 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 KCNB1Q14721 858 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 PFKFB3Q16875 520 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
CCDC36-201ENST00000296449 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
CCDC36-201ENST00000296449 PSMA7O14818 248 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 CPP00450 1065 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 PCP11498 1178 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 IDEP14735 1019 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 EVX2Q03828 476 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 CHRNDQ07001 517 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 DNAJC21Q5F1R6 531 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 FAM205AQ6ZU69 1335 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 CCDC170Q8IYT3 715 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 GIMAP8Q8ND71 665 aaPredicted RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 AENQ8WTP8 325 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 RUBCNQ92622 972 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 EXOC1Q9NV70 894 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 BAZ2AQ9UIF9 1905 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 MACROD2A1Z1Q3 448 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 PP2D1A8MPX8 630 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 IPO7O95373 1038 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 IGHMBP2P38935 993 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 CYP27A1Q02318 531 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 EFCAB13Q8IY85 973 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 FAM76AQ8TAV0 307 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 EEF2KMTQ96G04 330 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 DUSP9Q99956 384 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 FAM107BQ9H098 131 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 JADE2Q9NQC1 790 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 ZNHIT6Q9NWK9 470 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 ZNF804BA4D1E1 1349 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 GOLGA6BA6NDN3 693 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 EVA1CP58658 441 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 ZBED6P86452 979 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 IQCEQ6IPM2 695 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 NUP58Q9BVL2 599 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 KAT14Q9H8E8 782 aa11.39□□□□□ -0.59
CCDC36-201ENST00000296449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC36-201ENST00000296449 STRCP1A6NGW2 1772 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 RREB1Q92766 1687 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
CCDC36-201ENST00000296449 CACNA1SQ13698 1873 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 GOLGA6CA6NDK9 693 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 USP17L21D6R901 530 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 ZNF263O14978 683 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 MYL1P05976 194 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 GOLGA6DP0CG33 693 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 VAV2P52735 878 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 TBC1D8BQ0IIM8 1120 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 SKIDA1Q1XH10 827 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 CREG2Q8IUH2 290 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 BLIDQ8IZY5 108 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 CSGALNACT2Q8N6G5 542 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 LRRC15Q8TF66 581 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 ZNF384Q8TF68 577 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 HINFPQ9BQA5 517 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 KBTBD4Q9NVX7 518 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 GOLGA6AQ9NYA3 693 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 ITGB4P16144 1822 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 CALML3P27482 149 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 GYG1P46976 350 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 ITIH3Q06033 890 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 KIF5AQ12840 1032 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 EZH2Q15910 746 aaKnown RBP11.38□□□□□ -0.59
CCDC36-201ENST00000296449 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
CCDC36-201ENST00000296449 ICE2Q659A1 982 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms