RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 IL17RBQ9NRM6 502 aa23.26■■□□□ 1.31
CXCL3-201ENST00000296026 DUSP11O75319 330 aaKnown RBP23.25■■□□□ 1.31
CXCL3-201ENST00000296026 CLTBP09497 229 aa23.25■■□□□ 1.31
CXCL3-201ENST00000296026 PDE1AP54750 535 aa23.25■■□□□ 1.31
CXCL3-201ENST00000296026 FAM109BQ6ICB4 259 aaPredicted RBP23.25■■□□□ 1.31
CXCL3-201ENST00000296026 KLHDC9Q8NEP7 349 aa23.25■■□□□ 1.31
CXCL3-201ENST00000296026 ABHD16BQ9H3Z7 469 aa23.25■■□□□ 1.31
CXCL3-201ENST00000296026 NMT2O60551 498 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 PQBP1O60828 265 aaKnown RBP23.24■■□□□ 1.31
CXCL3-201ENST00000296026 KCNA10Q16322 511 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 KCTD1Q719H9 257 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 ARMCX2Q7L311 632 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 NUP133Q8WUM0 1156 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 AGBL1Q96MI9 1066 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 ACAD9Q9H845 621 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 STARD7Q9NQZ5 370 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 ANAPC4Q9UJX5 808 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 ZNF536O15090 1300 aa23.24■■□□□ 1.31
CXCL3-201ENST00000296026 MOXD2PA6NHM9 499 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 RANBP6O60518 1105 aaKnown RBP23.23■■□□□ 1.31
CXCL3-201ENST00000296026 ITGB8P26012 769 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 CNTN2Q02246 1040 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 HDAC1Q13547 482 aaPredicted RBP23.23■■□□□ 1.31
CXCL3-201ENST00000296026 CCDC144BQ3MJ40 725 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 CCSAPQ6IQ19 270 aaPredicted RBP23.23■■□□□ 1.31
CXCL3-201ENST00000296026 RCSD1Q6JBY9 416 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 CCDC144CPQ8IYA2 1237 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 RNF146Q9NTX7 359 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 MCM3APO60318 1980 aa23.23■■□□□ 1.31
CXCL3-201ENST00000296026 MYADML2A6NDP7 307 aa23.22■■□□□ 1.31
CXCL3-201ENST00000296026 ADCY6O43306 1168 aa23.22■■□□□ 1.31
CXCL3-201ENST00000296026 PLA2G6O60733 806 aa23.22■■□□□ 1.31
CXCL3-201ENST00000296026 C6orf222P0C671 652 aaPredicted RBP23.22■■□□□ 1.31
CXCL3-201ENST00000296026 IRX5P78411 483 aaPredicted RBP23.22■■□□□ 1.31
CXCL3-201ENST00000296026 FAM161BQ96MY7 647 aa23.22■■□□□ 1.31
CXCL3-201ENST00000296026 A1CFQ9NQ94 594 aaKnown RBP23.22■■□□□ 1.31
CXCL3-201ENST00000296026 KIAA0355O15063 1070 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 ALAS1P13196 640 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 RAG1P15918 1043 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 CST5P28325 142 aaPredicted RBP23.21■■□□□ 1.31
CXCL3-201ENST00000296026 ALX1Q15699 326 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 TKFCQ3LXA3 575 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 RASGRP2Q7LDG7 609 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 ANKRD33Q7Z3H0 272 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 FAM133AQ8N9E0 248 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 FAM227BQ96M60 508 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 TOX2Q96NM4 488 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 TRERF1Q96PN7 1200 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 SPC25Q9HBM1 224 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 TMEM39AQ9NV64 488 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 MTMR7Q9Y216 660 aa23.21■■□□□ 1.31
CXCL3-201ENST00000296026 DCDC2CA8MYV0 355 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 ORC4O43929 436 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 SNAP25P60880 206 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 FAAP100Q0VG06 881 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 ZNF697Q5TEC3 545 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 CCDC174Q6PII3 467 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 PCSK9Q8NBP7 692 aaKnown RBP23.2■■□□□ 1.3
CXCL3-201ENST00000296026 GLT1D1Q96MS3 346 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 GUCD1Q96NT3 240 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 KATNBL1Q9H079 304 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 TOMM22Q9NS69 142 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 PRR12Q9ULL5 1215 aa23.2■■□□□ 1.3
CXCL3-201ENST00000296026 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 ASGR1P07306 291 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 FGRP09769 529 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 NOVP48745 357 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 GJA9P57773 515 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 UPF3AQ9H1J1 476 aaKnown RBP23.19■■□□□ 1.3
CXCL3-201ENST00000296026 COL6A3P12111 3177 aa23.19■■□□□ 1.3
CXCL3-201ENST00000296026 ELP1O95163 1332 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 SOWAHBA6NEL2 793 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 DLL1O00548 723 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 FGAP02671 866 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 EPHB4P54760 987 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 CCDC96Q2M329 555 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 RRP12Q5JTH9 1297 aaKnown RBP23.18■■□□□ 1.3
CXCL3-201ENST00000296026 GNASQ5JWF2 1037 aa23.18■■□□□ 1.3
CXCL3-201ENST00000296026 ASB14A6NK59 587 aa23.17■■□□□ 1.3
CXCL3-201ENST00000296026 FPGSQ05932 587 aa23.17■■□□□ 1.3
CXCL3-201ENST00000296026 MUM1L1Q5H9M0 696 aa23.17■■□□□ 1.3
CXCL3-201ENST00000296026 DCAF4Q8WV16 495 aa23.17■■□□□ 1.3
CXCL3-201ENST00000296026 VTI1AQ96AJ9 217 aa23.17■■□□□ 1.3
CXCL3-201ENST00000296026 LNPKQ9C0E8 428 aa23.17■■□□□ 1.3
CXCL3-201ENST00000296026 TRIM6-TRIM34B2RNG4 842 aa23.16■■□□□ 1.3
CXCL3-201ENST00000296026 HSPD1P10809 573 aaKnown RBP23.16■■□□□ 1.3
CXCL3-201ENST00000296026 SMAD3P84022 425 aaKnown RBP23.16■■□□□ 1.3
CXCL3-201ENST00000296026 TNFAIP2Q03169 654 aa23.16■■□□□ 1.3
CXCL3-201ENST00000296026 NMIQ13287 307 aaPredicted RBP23.16■■□□□ 1.3
CXCL3-201ENST00000296026 TICAM2Q86XR7 235 aa23.16■■□□□ 1.3
CXCL3-201ENST00000296026 CCPG1Q9ULG6 757 aa23.16■■□□□ 1.3
CXCL3-201ENST00000296026 MROH7Q68CQ1 1323 aa23.15■■□□□ 1.3
CXCL3-201ENST00000296026 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.15■■□□□ 1.3
CXCL3-201ENST00000296026 CTAGE5O15320 804 aa23.15■■□□□ 1.3
CXCL3-201ENST00000296026 CDK7P50613 346 aa23.15■■□□□ 1.3
CXCL3-201ENST00000296026 TTBK2Q6IQ55 1244 aa23.15■■□□□ 1.3
CXCL3-201ENST00000296026 NOL8Q76FK4 1167 aaKnown RBP23.15■■□□□ 1.3
CXCL3-201ENST00000296026 ZNF589Q86UQ0 364 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms