RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 PPM1EQ8WY54 764 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 SHISA4Q96DD7 197 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 BAG3O95817 575 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 GSTO1P78417 241 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 MORC3Q14149 939 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 APTXQ7Z2E3 356 aaKnown RBP17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 ZC3H12CQ9C0D7 883 aaKnown RBP17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 PDE6BP35913 854 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 STX17P56962 302 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 TFAP4Q01664 338 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 SBK1Q52WX2 424 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 USP17L1Q7RTZ2 530 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 TMTC2Q8N394 836 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 CTAGE15A4D2H0 777 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 CTAGE8P0CG41 777 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 SARSP49591 514 aaKnown RBP17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 TROAPQ12815 778 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 RASGRP2Q7LDG7 609 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 CTAGE6Q86UF2 777 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 CTAGE4Q8IX94 777 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 TEX11Q8IYF3 940 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 KRI1Q8N9T8 703 aaKnown RBP17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 MLKLQ8NB16 471 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
LRRTM1-201ENST00000295057 BTBD18B2RXH4 712 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 ORC4O43929 436 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 RNF40O75150 1001 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 CASP14P31944 242 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 SCNN1DP51172 638 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 PPP4CP60510 307 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 IL17RBQ9NRM6 502 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 SYF2O95926 243 aaKnown RBP17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 DEFB132Q7Z7B7 95 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
LRRTM1-201ENST00000295057 GPR75-ASB3A0A0A6YYF3 556 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 RHBDL3P58872 404 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 OXER1Q8TDS5 423 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 MFAP3LO75121 409 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 COBLO75128 1261 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 LDHCP07864 332 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 NR5A1Q13285 461 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 TRIM29Q14134 588 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 TRIM22Q8IYM9 498 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 GDAP1L1Q96MZ0 367 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 NAPGQ99747 312 aaPredicted RBP17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 V9GY48 417 aaPredicted RBP17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 MAST2Q6P0Q8 1798 aa17.18■□□□□ 0.34
LRRTM1-201ENST00000295057 CASP1P29466 404 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 TOB1P50616 345 aaPredicted RBP17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 PICALMQ13492 652 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 MTA3Q9BTC8 594 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 HOOK1Q9UJC3 728 aaKnown RBP17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 DAGLAQ9Y4D2 1042 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 BAZ2BQ9UIF8 2168 aaKnown RBP17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 LTBP1Q14766 1721 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 NID2Q14112 1375 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 SLURP2P0DP57 97 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 CD44P16070 742 aaKnown RBP17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 FUT2Q10981 343 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 E2F4Q16254 413 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 SUGP1Q8IWZ8 645 aaKnown RBP17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 DACH1Q9UI36 760 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 PCDHAC2Q9Y5I4 1007 aa17.17■□□□□ 0.34
LRRTM1-201ENST00000295057 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 FLT1P17948 1338 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 STK36Q9NRP7 1315 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 GYPCP04921 128 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 CDC25AP30304 524 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 PBX1P40424 430 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 ERVK-24P63145 666 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 AKAP17AQ02040 695 aaKnown RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 PKN1Q16512 942 aa17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 CT47A1Q5JQC4 288 aaPredicted RBP17.16■□□□□ 0.34
LRRTM1-201ENST00000295057 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms