RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 RNF168Q8IYW5 571 aaPredicted RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 B4GALNT2Q8NHY0 566 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 STAMQ92783 540 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 IL2RBP14784 551 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 YAF2Q8IY57 180 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 ABTB1Q969K4 478 aaPredicted RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 BTG4Q9NY30 223 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 GRM8O00222 908 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 MYL3P08590 195 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 INPP5BP32019 993 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 MXD4Q14582 209 aaPredicted RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 PIP4K2CQ8TBX8 421 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 NAPGQ99747 312 aaPredicted RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 LRWD1Q9UFC0 647 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 SART1O43290 800 aaKnown RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 SERPIND1P05546 499 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 TSC22D1Q15714 1073 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 PPP1R9AQ9ULJ8 1098 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 POLR2DO15514 142 aaKnown RBP13.58□□□□□ -0.23
SLX4-201ENST00000294008 APOA4P06727 396 aa13.58□□□□□ -0.23
SLX4-201ENST00000294008 EEF1DP29692 281 aaKnown RBP13.58□□□□□ -0.23
SLX4-201ENST00000294008 POLR3EQ9NVU0 708 aa13.58□□□□□ -0.23
SLX4-201ENST00000294008 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.23
SLX4-201ENST00000294008 CREB3O43889 395 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 FLOT1O75955 427 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.24
SLX4-201ENST00000294008 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 TRIM67Q6ZTA4 783 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 CABS1Q96KC9 395 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 DACH2Q96NX9 599 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 Q9H521 79 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 RECQLP46063 649 aaPredicted RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 DYNLT1P63172 113 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 NOLC1Q14978 699 aaKnown RBP eCLIP13.58□□□□□ -0.24
SLX4-201ENST00000294008 RWDD4Q6NW29 188 aaKnown RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 SAMSN1Q9NSI8 373 aaKnown RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 IRX4P78413 519 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 KRT71Q3SY84 523 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 MYL10Q9BUA6 226 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 SARS2Q9NP81 518 aaKnown RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 FAM47AQ5JRC9 791 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 CYP26C1Q6V0L0 522 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 PPP1R14AQ96A00 147 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
SLX4-201ENST00000294008 SYNRGQ9UMZ2 1314 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 THAP12O43422 761 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 EVCP57679 992 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 BFSP1Q12934 665 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 RPS6KA1Q15418 735 aa13.58□□□□□ -0.24
SLX4-201ENST00000294008 IFNA8P32881 189 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 RNF139Q8WU17 664 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 GSDMAQ96QA5 445 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 MAST3O60307 1309 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 UBXN2AP68543 259 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 GTF2IP78347 998 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 CHMP1BQ7LBR1 199 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 ZFYVE1Q9HBF4 777 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 EFCAB14O75071 495 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 ANP32DO95626 131 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 PDE6CP51160 858 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 MAP3K7CLP57077 242 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 CDKL2Q92772 493 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 DPH5Q9H2P9 285 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 SERPINI2O75830 405 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 WHAMMP3Q1A5X7 153 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 RNF40O75150 1001 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
SLX4-201ENST00000294008 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 PCDHB4Q9Y5E5 795 aa13.57□□□□□ -0.24
SLX4-201ENST00000294008 CFLARO15519 480 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 OSBPP22059 807 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 KIF19Q2TAC6 998 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 SPOPLQ6IQ16 392 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 EPAS1Q99814 870 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 C6orf203Q9P0P8 240 aaPredicted RBP13.56□□□□□ -0.24
SLX4-201ENST00000294008 CFAP69A5D8W1 941 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 TYRO3Q06418 890 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 SMAD5Q99717 465 aaKnown RBP13.56□□□□□ -0.24
SLX4-201ENST00000294008 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
SLX4-201ENST00000294008 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
SLX4-201ENST00000294008 POLA2Q14181 598 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 TAF11Q15544 211 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
SLX4-201ENST00000294008 SYCE1Q8N0S2 351 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
SLX4-201ENST00000294008 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 ZNF148Q9UQR1 794 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 F13A1P00488 732 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 OSBPL10Q9BXB5 764 aa13.56□□□□□ -0.24
SLX4-201ENST00000294008 EIF2AQ9BY44 585 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms