RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 KRT86O43790 486 aa21.5■■□□□ 1.03
LSM12-201ENST00000293406 RHOBTB3O94955 611 aa21.5■■□□□ 1.03
LSM12-201ENST00000293406 PAPD7Q5XG87 772 aaKnown RBP21.5■■□□□ 1.03
LSM12-201ENST00000293406 ZNF662Q6ZS27 426 aa21.5■■□□□ 1.03
LSM12-201ENST00000293406 C3orf67Q6ZVT6 689 aa21.5■■□□□ 1.03
LSM12-201ENST00000293406 GIMAP8Q8ND71 665 aaPredicted RBP21.5■■□□□ 1.03
LSM12-201ENST00000293406 NOC3LQ8WTT2 800 aaKnown RBP21.5■■□□□ 1.03
LSM12-201ENST00000293406 MMS19Q96T76 1030 aa21.5■■□□□ 1.03
LSM12-201ENST00000293406 ZNF652Q9Y2D9 606 aa21.5■■□□□ 1.03
LSM12-201ENST00000293406 LOC102724428A0A0B4J2F2 783 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 IVLP07476 585 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 SRGNP10124 158 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 CYLC1P35663 651 aaPredicted RBP21.49■■□□□ 1.03
LSM12-201ENST00000293406 SIK1P57059 783 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 MEA1Q16626 185 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 ERFEQ4G0M1 354 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 TTI2Q6NXR4 508 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 JAKMIP2Q96AA8 810 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 PLIN2Q99541 437 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 TMEM60Q9H2L4 133 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 VIPAS39Q9H9C1 493 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 EXOC1Q9NV70 894 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 ZNHIT6Q9NWK9 470 aaKnown RBP21.49■■□□□ 1.03
LSM12-201ENST00000293406 SRGAP2O75044 1071 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 ADAMTS2O95450 1211 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 TRIM21P19474 475 aaKnown RBP21.49■■□□□ 1.03
LSM12-201ENST00000293406 SEMA3FQ13275 785 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 ITPK1Q13572 414 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 MAP9Q49MG5 647 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 SBK1Q52WX2 424 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 TUBGCP2Q9BSJ2 902 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 KBTBD4Q9NVX7 518 aa21.49■■□□□ 1.03
LSM12-201ENST00000293406 DOT1LQ8TEK3 1739 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 IPO7O95373 1038 aaKnown RBP21.48■■□□□ 1.03
LSM12-201ENST00000293406 CKAP4Q07065 602 aaKnown RBP21.48■■□□□ 1.03
LSM12-201ENST00000293406 SF3B3Q15393 1217 aaKnown RBP21.48■■□□□ 1.03
LSM12-201ENST00000293406 FBXO33Q7Z6M2 555 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 CSGALNACT2Q8N6G5 542 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 RPGRIP1Q96KN7 1286 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 CAPZA3Q96KX2 299 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 NUP58Q9BVL2 599 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 CCSER1Q9C0I3 900 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 SCN7AQ01118 1682 aa21.48■■□□□ 1.03
LSM12-201ENST00000293406 TYW1BQ6NUM6 668 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 DHTKD1Q96HY7 919 aaPredicted RBP21.47■■□□□ 1.03
LSM12-201ENST00000293406 AGPAT5Q9NUQ2 364 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 RREB1Q92766 1687 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 M0R2N6 131 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 TNNT3P45378 269 aaPredicted RBP21.47■■□□□ 1.03
LSM12-201ENST00000293406 INF2Q27J81 1249 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 STAG2Q8N3U4 1231 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 PNMA1Q8ND90 353 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 TTYH3Q9C0H2 523 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 PCDHA6Q9UN73 950 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 PCDHA8Q9Y5H6 950 aa21.47■■□□□ 1.03
LSM12-201ENST00000293406 TFAP4Q01664 338 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 SLC4A8Q2Y0W8 1093 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 RETREG2Q8NC44 543 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 BBXQ8WY36 941 aaPredicted RBP21.46■■□□□ 1.03
LSM12-201ENST00000293406 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 NHEJ1Q9H9Q4 299 aaPredicted RBP21.46■■□□□ 1.03
LSM12-201ENST00000293406 LCMT1Q9UIC8 334 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 TARSL2A2RTX5 802 aaKnown RBP21.46■■□□□ 1.03
LSM12-201ENST00000293406 MYO1CO00159 1063 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 RPS6KA5O75582 802 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 KLRK1P26718 216 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 PRDX5P30044 214 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 TBC1D8BQ0IIM8 1120 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 CCDC170Q8IYT3 715 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 DUSP9Q99956 384 aaKnown RBP21.46■■□□□ 1.03
LSM12-201ENST00000293406 FAM204AQ9H8W3 233 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 MCM9Q9NXL9 1143 aa21.46■■□□□ 1.03
LSM12-201ENST00000293406 AARSP49588 968 aaKnown RBP eCLIP21.45■■□□□ 1.02
LSM12-201ENST00000293406 SRLQ86TD4 932 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 DGKHQ86XP1 1220 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 CAGE1Q8TC20 777 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
LSM12-201ENST00000293406 EEF2KMTQ96G04 330 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 PCMTD1Q96MG8 357 aaPredicted RBP21.45■■□□□ 1.02
LSM12-201ENST00000293406 LACRTQ9GZZ8 138 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 LAMB1P07942 1786 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 RCCD1A6NED2 376 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 EIF3CLB5ME19 914 aaKnown RBP21.45■■□□□ 1.02
LSM12-201ENST00000293406 LAD1O00515 517 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 GNAQP50148 359 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 ZBED6P86452 979 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 GOLGA6L1Q8N7Z2 621 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 CCDC47Q96A33 483 aaKnown RBP21.45■■□□□ 1.02
LSM12-201ENST00000293406 EIF3CQ99613 913 aaKnown RBP21.45■■□□□ 1.02
LSM12-201ENST00000293406 IL17RBQ9NRM6 502 aa21.45■■□□□ 1.02
LSM12-201ENST00000293406 BICDL2A1A5D9 508 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 RNF40O75150 1001 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 USP17L8P0C7I0 530 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
LSM12-201ENST00000293406 KLK7P49862 253 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 GALNT17Q6IS24 598 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 HEATR3Q7Z4Q2 680 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 P2RX5Q93086 422 aa21.44■■□□□ 1.02
LSM12-201ENST00000293406 CNOT6LQ96LI5 555 aaKnown RBP21.44■■□□□ 1.02
LSM12-201ENST00000293406 CUEDC2Q9H467 287 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms