RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 BMP3P12645 472 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 MCCP23508 829 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 MTFR1Q15390 333 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 PLEKHH3Q7Z736 793 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 RIOX2Q8IUF8 465 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 MB21D2Q8IYB1 491 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-201ENST00000288344 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 IGDCC4Q8TDY8 1250 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 SH3TC2Q8TF17 1288 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 ESR2Q92731 530 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 TANGO6Q9C0B7 1094 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 FEM1BQ9UK73 627 aa10.81□□□□□ -0.68
HMGN1-201ENST00000288344 DNAJC25-GNG10A0A024R161 153 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 SLC15A5A6NIM6 579 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 CCDC85CA6NKD9 419 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 STRNO43815 780 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 ADCY3O60266 1144 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 COBLO75128 1261 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 ERCC3P19447 782 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 GRK4P32298 578 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 SLC35G1Q2M3R5 365 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
HMGN1-201ENST00000288344 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-201ENST00000288344 TTBK2Q6IQ55 1244 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 UBE2Q1Q7Z7E8 422 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 ABRAQ8N0Z2 381 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 NPLOC4Q8TAT6 608 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 COA7Q96BR5 231 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 ZSCAN10Q96SZ4 725 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-201ENST00000288344 SLF1Q9BQI6 1058 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 PAGR1Q9BTK6 254 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 SENP2Q9HC62 589 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 FLRT1Q9NZU1 646 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 ZNF236Q9UL36 1845 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
HMGN1-201ENST00000288344 SLC27A2O14975 620 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 ELNP15502 786 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 STAT3P40763 770 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 OAZ1P54368 228 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 ZNF543Q08ER8 600 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 TRIM32Q13049 653 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 MAP2K5Q13163 448 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 CCL14Q16627 93 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 KCTD1Q719H9 257 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 DCAF4Q8WV16 495 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 TRIB2Q92519 343 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 FGD4Q96M96 766 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 KRT23Q9C075 422 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 MROH8Q9H579 483 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 CNNM2Q9H8M5 875 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 PAK6Q9NQU5 681 aaPredicted RBP10.79□□□□□ -0.68
HMGN1-201ENST00000288344 PRR12Q9ULL5 1215 aa10.79□□□□□ -0.68
HMGN1-201ENST00000288344 RANBP2P49792 3224 aaKnown RBP10.78□□□□□ -0.68
HMGN1-201ENST00000288344 POTEMA6NI47 508 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 TMEM232C9JQI7 657 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 CDC45O75419 566 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 SLC25A27O95847 323 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 NEFLP07196 543 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 FDX1P10109 184 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 HOXB3P14651 431 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-201ENST00000288344 SLC1A4P43007 532 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 CCNA1P78396 465 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 EXOSC10Q01780 885 aaKnown RBP10.78□□□□□ -0.68
HMGN1-201ENST00000288344 TROAPQ12815 778 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 CREB3L3Q68CJ9 461 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 RAET1EQ8TD07 263 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 CHURC1Q8WUH1 139 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 SOCS4Q8WXH5 440 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 SHISA4Q96DD7 197 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 NUDT12Q9BQG2 462 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 MTA3Q9BTC8 594 aa10.78□□□□□ -0.68
HMGN1-201ENST00000288344 RANBP17Q9H2T7 1088 aaKnown RBP10.78□□□□□ -0.68
HMGN1-201ENST00000288344 TNKSO95271 1327 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 PALM3A6NDB9 673 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-201ENST00000288344 GRXCR2A6NFK2 248 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 GJB1P08034 283 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 EN2P19622 333 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-201ENST00000288344 CYP2B6P20813 491 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 CCDC178Q5BJE1 867 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 NBPF11Q86T75 865 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 FAM160B2Q86V87 743 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 MTMR8Q96EF0 704 aa10.77□□□□□ -0.69
HMGN1-201ENST00000288344 PDE4DIPQ5VU43 2346 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
HMGN1-201ENST00000288344 INHAP05111 366 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 ADORA2AP29274 412 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 GJA8P48165 433 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 STAT2P52630 851 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 SOX10P56693 466 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 TRPV1Q8NER1 839 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 NCOA7Q8NI08 942 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms