RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 C1orf112Q9NSG2 853 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 GTPBP6O43824 516 aaPredicted RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 N4BP1O75113 896 aaKnown RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ASNSP08243 561 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ATF7P17544 494 aaPredicted RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 MECOMQ03112 1051 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ANO3Q9BYT9 981 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 SLC16A2P36021 539 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ADCK5Q3MIX3 580 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 SYNMO15061 1565 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ODR4Q5SWX8 454 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 C8orf74Q6P047 294 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 CCDC127Q96BQ5 260 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 PUS7LQ9H0K6 701 aaKnown RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 HESX1Q9UBX0 185 aa20.45■□□□□ 0.86
PCDH1-201ENST00000287008 ABT1Q9ULW3 272 aaKnown RBP20.45■□□□□ 0.86
PCDH1-201ENST00000287008 KIF1BO60333 1816 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 CLCN1P35523 988 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 SCRN1Q12765 414 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 RSPH3Q86UC2 560 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 TRIML1Q8N9V2 468 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 HAUS2Q9NVX0 235 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 RTEL1Q9NZ71 1219 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 CHD1O14646 1710 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 CEP104O60308 925 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 CEP63Q96MT8 703 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 KCNK9Q9NPC2 374 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 M0R2C6 588 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 ATP2C2O75185 946 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 TFDP1Q14186 410 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 PODNQ7Z5L7 613 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 SYCE1Q8N0S2 351 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 MMS19Q96T76 1030 aa20.44■□□□□ 0.86
PCDH1-201ENST00000287008 hCG_1984214I3L0E3 225 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 ZBTB24O43167 697 aaPredicted RBP20.43■□□□□ 0.86
PCDH1-201ENST00000287008 UBXN2AP68543 259 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 ZNF713Q8N859 430 aaPredicted RBP20.43■□□□□ 0.86
PCDH1-201ENST00000287008 ZNF577Q9BSK1 485 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 KIAA1024Q9UPX6 916 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 LAD1O00515 517 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 ZBTB7AO95365 584 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 TUBB2AQ13885 445 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 SLC27A3Q5K4L6 730 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 SMC6Q96SB8 1091 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 TUBB2BQ9BVA1 445 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 SASH1O94885 1247 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 DLATP10515 647 aaKnown RBP20.43■□□□□ 0.86
PCDH1-201ENST00000287008 AOC3Q16853 763 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 FOXP1Q9H334 677 aaPredicted RBP20.43■□□□□ 0.86
PCDH1-201ENST00000287008 CALCOCO1Q9P1Z2 691 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 ASIC3Q9UHC3 531 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 KDM6BO15054 1643 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 NT5C2P49902 561 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 UAP1Q16222 522 aaPredicted RBP20.43■□□□□ 0.86
PCDH1-201ENST00000287008 PEX26Q7Z412 305 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 FAM160B2Q86V87 743 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 MYO1AQ9UBC5 1043 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
PCDH1-201ENST00000287008 GBP6Q6ZN66 633 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 RPS6KC1Q96S38 1066 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 NUB1Q9Y5A7 615 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 ALDH3A1P30838 453 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 PPP2R3AQ06190 1150 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 KRBA2Q6ZNG9 492 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 UBLCP1Q8WVY7 318 aaPredicted RBP20.42■□□□□ 0.86
PCDH1-201ENST00000287008 DYNLL2Q96FJ2 89 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 GPR101Q96P66 508 aaPredicted RBP20.42■□□□□ 0.86
PCDH1-201ENST00000287008 MTX1Q13505 466 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 ZNF710Q8N1W2 664 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 OR8K1Q8NGG5 319 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 GJA10Q969M2 543 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 SLF1Q9BQI6 1058 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 ODF2LQ9ULJ1 636 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 MYO3BQ8WXR4 1341 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 HNRNPDLO14979 420 aaKnown RBP20.42■□□□□ 0.86
PCDH1-201ENST00000287008 XPOTO43592 962 aaKnown RBP20.42■□□□□ 0.86
PCDH1-201ENST00000287008 RPS6KA1Q15418 735 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 ABI1Q8IZP0 508 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 PIGSQ96S52 555 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 MAGEF1Q9HAY2 307 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 PCDHA7Q9UN72 937 aa20.42■□□□□ 0.86
PCDH1-201ENST00000287008 TNS3Q68CZ2 1445 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 CLUL1Q15846 466 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 SYDE2Q5VT97 1194 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 EP400NLQ6ZTU2 488 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 POMGNT1Q8WZA1 660 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 LSM14BQ9BX40 385 aaKnown RBP20.41■□□□□ 0.86
PCDH1-201ENST00000287008 SLC39A2Q9NP94 309 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 COL15A1P39059 1388 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 ZNF445P59923 1031 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 USP17L2Q6R6M4 530 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 SEPT14Q6ZU15 432 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 ARHGEF1Q92888 912 aaKnown RBP20.41■□□□□ 0.86
PCDH1-201ENST00000287008 SEPT9Q9UHD8 586 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms