RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 HOXD10P28358 340 aa20.29■□□□□ 0.84
ATG3-201ENST00000283290 STK3Q13188 491 aa20.29■□□□□ 0.84
ATG3-201ENST00000283290 GPATCH4Q5T3I0 446 aaKnown RBP20.29■□□□□ 0.84
ATG3-201ENST00000283290 SNRNP48Q6IEG0 339 aaKnown RBP20.29■□□□□ 0.84
ATG3-201ENST00000283290 BTNL9Q6UXG8 535 aa20.29■□□□□ 0.84
ATG3-201ENST00000283290 NCAPG2Q86XI2 1143 aa20.29■□□□□ 0.84
ATG3-201ENST00000283290 TMTC2Q8N394 836 aa20.29■□□□□ 0.84
ATG3-201ENST00000283290 MB21D1Q8N884 522 aa20.29■□□□□ 0.84
ATG3-201ENST00000283290 ZNF536O15090 1300 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 hCG_1642624A0A1W2PR95 340 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 ZBTB43O43298 467 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 CYTH3O43739 400 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 ZBED4O75132 1171 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 ERCC3P19447 782 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 RBM25P49756 843 aaKnown RBP20.28■□□□□ 0.84
ATG3-201ENST00000283290 AK2P54819 239 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 COA7Q96BR5 231 aa20.28■□□□□ 0.84
ATG3-201ENST00000283290 UPF2Q9HAU5 1272 aaKnown RBP20.28■□□□□ 0.84
ATG3-201ENST00000283290 GOLGA8AA7E2F4 631 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 CDC27P30260 824 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 STAT3P40763 770 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
ATG3-201ENST00000283290 CCNA1P78396 465 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 GPR142Q7Z601 462 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.84
ATG3-201ENST00000283290 CTCFLQ8NI51 663 aaPredicted RBP20.27■□□□□ 0.84
ATG3-201ENST00000283290 TBC1D32Q96NH3 1257 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 AGXT2Q9BYV1 514 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
ATG3-201ENST00000283290 NCOA5Q9HCD5 579 aaKnown RBP20.27■□□□□ 0.84
ATG3-201ENST00000283290 PLA2G6O60733 806 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 MAPK4P31152 587 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 FLT3LGP49771 235 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 PRMT2P55345 433 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 CDC37Q16543 378 aaPredicted RBP20.26■□□□□ 0.83
ATG3-201ENST00000283290 USH1GQ495M9 461 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 SYNE3Q6ZMZ3 975 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 SRBD1Q8N5C6 995 aaKnown RBP20.26■□□□□ 0.83
ATG3-201ENST00000283290 FANCBQ8NB91 859 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 IL17RAQ96F46 866 aa20.26■□□□□ 0.83
ATG3-201ENST00000283290 RANBP17Q9H2T7 1088 aaKnown RBP20.26■□□□□ 0.83
ATG3-201ENST00000283290 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
ATG3-201ENST00000283290 LARGE1O95461 756 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 RAET1EQ8TD07 263 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 PIGSQ96S52 555 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 CWC22Q9HCG8 908 aaKnown RBP20.25■□□□□ 0.83
ATG3-201ENST00000283290 ALAS1P13196 640 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 PDIA3P30101 505 aaKnown RBP20.25■□□□□ 0.83
ATG3-201ENST00000283290 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
ATG3-201ENST00000283290 RTN1Q16799 776 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 PLEKHH3Q7Z736 793 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 GJD2Q9UKL4 321 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 TPCN1Q9ULQ1 816 aa20.25■□□□□ 0.83
ATG3-201ENST00000283290 PPP1R11O60927 126 aaPredicted RBP20.24■□□□□ 0.83
ATG3-201ENST00000283290 METAP2P50579 478 aaKnown RBP eCLIP20.24■□□□□ 0.83
ATG3-201ENST00000283290 MUM1L1Q5H9M0 696 aa20.24■□□□□ 0.83
ATG3-201ENST00000283290 SH3TC2Q8TF17 1288 aa20.24■□□□□ 0.83
ATG3-201ENST00000283290 TEX13BQ9BXU2 312 aa20.24■□□□□ 0.83
ATG3-201ENST00000283290 CCPG1Q9ULG6 757 aa20.24■□□□□ 0.83
ATG3-201ENST00000283290 PLXNA1Q9UIW2 1896 aa20.24■□□□□ 0.83
ATG3-201ENST00000283290 CCDC85CA6NKD9 419 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 CAPN15O75808 1086 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 CALM1P0DP23 149 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 CALM2P0DP24 149 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 CALM3P0DP25 149 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 SLC9C1Q4G0N8 1177 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 RIOX2Q8IUF8 465 aa20.23■□□□□ 0.83
ATG3-201ENST00000283290 KIF5BP33176 963 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 TMTC3Q6ZXV5 915 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 FBXL16Q8N461 479 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 SHCBP1Q8NEM2 672 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 LCTP09848 1927 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 BRCA2P51587 3418 aa20.22■□□□□ 0.83
ATG3-201ENST00000283290 ADCY3O60266 1144 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
ATG3-201ENST00000283290 ICAM1P05362 532 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 PGK2P07205 417 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 ELNP15502 786 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 GRK4P32298 578 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 IRF5Q13568 498 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 MORN1Q5T089 497 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 NECAB1Q8N987 351 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 NUDT12Q9BQG2 462 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 RIOX1Q9H6W3 641 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 RNF146Q9NTX7 359 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 CYP2B6P20813 491 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 PTPREP23469 700 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 SOCS4Q8WXH5 440 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 USP6NLQ92738 828 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 TRERF1Q96PN7 1200 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 MAP3K14Q99558 947 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 IVNS1ABPQ9Y6Y0 642 aa20.21■□□□□ 0.83
ATG3-201ENST00000283290 CNTNAP5Q8WYK1 1306 aa20.2■□□□□ 0.82
ATG3-201ENST00000283290 NFIBO00712 420 aa20.2■□□□□ 0.82
ATG3-201ENST00000283290 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
ATG3-201ENST00000283290 SLC25A27O95847 323 aa20.2■□□□□ 0.82
ATG3-201ENST00000283290 PHKBQ93100 1093 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms