RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PCDHA4Q9UN74 947 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 DCAF8L1A6NGE4 600 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 PDHBP11177 359 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 KRBA2Q6ZNG9 492 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 BARHL2Q9NY43 387 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 FRMPD2Q68DX3 1309 aaPredicted RBP23.92■■□□□ 1.42
YBX3-202ENST00000279550 M0R2N6 131 aa23.92■■□□□ 1.42
YBX3-202ENST00000279550 BIN1O00499 593 aa23.92■■□□□ 1.42
YBX3-202ENST00000279550 PTMAP06454 111 aaKnown RBP23.92■■□□□ 1.42
YBX3-202ENST00000279550 DPCR1Q3MIW9 517 aa23.92■■□□□ 1.42
YBX3-202ENST00000279550 KRT26Q7Z3Y9 468 aa23.92■■□□□ 1.42
YBX3-202ENST00000279550 PNMA8AQ86V59 439 aaPredicted RBP23.92■■□□□ 1.42
YBX3-202ENST00000279550 DHX40Q8IX18 779 aaKnown RBP23.92■■□□□ 1.42
YBX3-202ENST00000279550 ASNSP08243 561 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 SNHG28P0DPA3 235 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 PNOCQ13519 176 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 SUPT20HL1Q3ZLR7 823 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
YBX3-202ENST00000279550 ZNF341Q9BYN7 854 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 UBA5Q9GZZ9 404 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 FAM13BQ9NYF5 915 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 SSC5DA1L4H1 1573 aa23.91■■□□□ 1.42
YBX3-202ENST00000279550 POLR2AP24928 1970 aaKnown RBP23.91■■□□□ 1.42
YBX3-202ENST00000279550 MYH4Q9Y623 1939 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 ADM5C9JUS6 153 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 FOXN1O15353 648 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 CTNND1O60716 968 aaKnown RBP23.9■■□□□ 1.42
YBX3-202ENST00000279550 NLRP12P59046 1061 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 DAGLBQ8NCG7 672 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 TUBE1Q9UJT0 475 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 HOMER1Q86YM7 354 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 CEP57L1Q8IYX8 460 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 PIGSQ96S52 555 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 VAT1LQ9HCJ6 419 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 PCDHA6Q9UN73 950 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 PCDHA8Q9Y5H6 950 aa23.9■■□□□ 1.42
YBX3-202ENST00000279550 BMP15O95972 392 aa23.89■■□□□ 1.41
YBX3-202ENST00000279550 TRAPPC10P48553 1259 aa23.89■■□□□ 1.41
YBX3-202ENST00000279550 ATP2C1P98194 919 aaPredicted RBP23.89■■□□□ 1.41
YBX3-202ENST00000279550 CCDC148Q8NFR7 591 aa23.89■■□□□ 1.41
YBX3-202ENST00000279550 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.89■■□□□ 1.41
YBX3-202ENST00000279550 SERTAD1Q9UHV2 236 aa23.89■■□□□ 1.41
YBX3-202ENST00000279550 ZNF112Q9UJU3 913 aa23.89■■□□□ 1.41
YBX3-202ENST00000279550 SYNPO2Q9UMS6 1093 aa23.89■■□□□ 1.41
YBX3-202ENST00000279550 A0A1W2PRG0 241 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 POLR2DO15514 142 aaKnown RBP23.88■■□□□ 1.41
YBX3-202ENST00000279550 SMARCA1P28370 1054 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 CLCN1P35523 988 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 MDM2Q00987 491 aaPredicted RBP23.88■■□□□ 1.41
YBX3-202ENST00000279550 PTGDRQ13258 359 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 ASPRV1Q53RT3 343 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 AOPEPQ8N6M6 819 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 CNNM3Q8NE01 707 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 RRP36Q96EU6 259 aaKnown RBP23.88■■□□□ 1.41
YBX3-202ENST00000279550 RIOX1Q9H6W3 641 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 ARHGEF10LQ9HCE6 1279 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 GINM1Q9NU53 330 aa23.88■■□□□ 1.41
YBX3-202ENST00000279550 A0A087X0B3 334 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 INPP5BP32019 993 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 ZNF75DP51815 510 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 ISM2Q6H9L7 571 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 DLK2Q6UY11 383 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 EPSTI1Q96J88 318 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 WRNIP1Q96S55 665 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 GPCPD1Q9NPB8 672 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 ZKSCAN5Q9Y2L8 839 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 ACTN4O43707 911 aaKnown RBP23.87■■□□□ 1.41
YBX3-202ENST00000279550 MCM7P33993 719 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 GMCL1P1Q8NEA9 526 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 FERMT2Q96AC1 680 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 KLRG1Q96E93 195 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 FZD1Q9UP38 647 aa23.87■■□□□ 1.41
YBX3-202ENST00000279550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.87■■□□□ 1.41
YBX3-202ENST00000279550 PRR29P0C7W0 189 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 ECE1P42892 770 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 NAPAP54920 295 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 ZNF543Q08ER8 600 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 IL17AQ16552 155 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 GALNT17Q6IS24 598 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 PLA2G4DQ86XP0 818 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 PDILTQ8N807 584 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 C4orf32Q8N8J7 132 aa23.86■■□□□ 1.41
YBX3-202ENST00000279550 F5H6K3 240 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 GOLGA6L19H0YKK7 550 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 RAD21O60216 631 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 KLRC3Q07444 240 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 GPATCH4Q5T3I0 446 aaKnown RBP23.85■■□□□ 1.41
YBX3-202ENST00000279550 GRAMD1CQ8IYS0 662 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 ACER1Q8TDN7 264 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 SYMPKQ92797 1274 aaKnown RBP23.85■■□□□ 1.41
YBX3-202ENST00000279550 ZMYND12Q9H0C1 365 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 TMX2Q9Y320 296 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 ATAD5Q96QE3 1844 aa23.85■■□□□ 1.41
YBX3-202ENST00000279550 CCDC194A0A1B0GVG4 234 aa23.84■■□□□ 1.41
YBX3-202ENST00000279550 ZRSR1Q15695 479 aaKnown RBP23.84■■□□□ 1.41
YBX3-202ENST00000279550 SLFN13Q68D06 897 aa23.84■■□□□ 1.41
YBX3-202ENST00000279550 ELOA2Q8IYF1 753 aaPredicted RBP23.84■■□□□ 1.41
YBX3-202ENST00000279550 FAM177A1Q8N128 213 aaPredicted RBP23.84■■□□□ 1.41
YBX3-202ENST00000279550 SPC24Q8NBT2 197 aa23.84■■□□□ 1.41
YBX3-202ENST00000279550 DCAF4Q8WV16 495 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms