RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 RIOX1Q9H6W3 641 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
ACER3-201ENST00000278544 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
ACER3-201ENST00000278544 CFBP00751 764 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 MKL1Q969V6 931 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 ZBTB5O15062 677 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 PTPRAP18433 802 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 PLS1Q14651 629 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 GSE1Q14687 1217 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 ISM2Q6H9L7 571 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.24■□□□□ 0.03
ACER3-201ENST00000278544 USP49Q70CQ1 688 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 AGBL1Q96MI9 1066 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 PLIN2Q99541 437 aa15.24■□□□□ 0.03
ACER3-201ENST00000278544 NOVP48745 357 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 TBC1D12O60347 775 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 ZSCAN23Q3MJ62 389 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 SLC30A10Q6XR72 485 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 GAS2L3Q86XJ1 694 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
ACER3-201ENST00000278544 PCDHA6Q9UN73 950 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 PCDHA8Q9Y5H6 950 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 NID2Q14112 1375 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 PNMA6FA0A0J9YX94 578 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 SCYL3Q8IZE3 742 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 RAVER2Q9HCJ3 691 aaKnown RBP15.23■□□□□ 0.03
ACER3-201ENST00000278544 EMILIN3Q9NT22 766 aa15.23■□□□□ 0.03
ACER3-201ENST00000278544 DCAF4Q8WV16 495 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 LZTS2Q9BRK4 669 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
ACER3-201ENST00000278544 PSTPIP2Q9H939 334 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 CEP350Q5VT06 3117 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 VCAM1P19320 739 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 TTC38Q5R3I4 469 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 C6orf50Q9HD87 102 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
ACER3-201ENST00000278544 CSADQ9Y600 493 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 CCNT1O60563 726 aaKnown RBP15.22■□□□□ 0.03
ACER3-201ENST00000278544 FBXO11Q86XK2 927 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 REXO1Q8N1G1 1221 aaKnown RBP15.22■□□□□ 0.03
ACER3-201ENST00000278544 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 TBCKQ8TEA7 893 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
ACER3-201ENST00000278544 ALAS1P13196 640 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 ADCY7P51828 1080 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 PTGDRQ13258 359 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 SKOR2Q2VWA4 1001 aaPredicted RBP15.21■□□□□ 0.03
ACER3-201ENST00000278544 MAP3K14Q99558 947 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 IRF6O14896 467 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 NDUFA8P51970 172 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 CSPP1Q1MSJ5 1256 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 CCDC148Q8NFR7 591 aa15.21■□□□□ 0.03
ACER3-201ENST00000278544 PURBQ96QR8 312 aaKnown RBP15.21■□□□□ 0.03
ACER3-201ENST00000278544 STAMQ92783 540 aa15.21■□□□□ 0.02
ACER3-201ENST00000278544 ATG4CQ96DT6 458 aa15.21■□□□□ 0.02
ACER3-201ENST00000278544 BRCA2P51587 3418 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 GMCL1P1Q8NEA9 526 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 SSC5DA1L4H1 1573 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 IQCA1LA6NCM1 817 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 PP2D1A8MPX8 630 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 CALML3P27482 149 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 NF2P35240 595 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
ACER3-201ENST00000278544 BACE1P56817 501 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 SLC39A14Q15043 492 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 RILPL1Q5EBL4 403 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 CCDC73Q6ZRK6 1079 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
ACER3-201ENST00000278544 EPSTI1Q96J88 318 aa15.2■□□□□ 0.02
ACER3-201ENST00000278544 BIN1O00499 593 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 TDP2O95551 362 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 MBD3O95983 291 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 TRMT1LQ7Z2T5 733 aaKnown RBP15.19■□□□□ 0.02
ACER3-201ENST00000278544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.19■□□□□ 0.02
ACER3-201ENST00000278544 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 GMCL1Q96IK5 515 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 TMEM60Q9H2L4 133 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 PKD2L1Q9P0L9 805 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 NOL7Q9UMY1 257 aaKnown RBP15.19■□□□□ 0.02
ACER3-201ENST00000278544 GNA11P29992 359 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 PTPAQ15257 358 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
ACER3-201ENST00000278544 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 ZMYND12Q9H0C1 365 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 POLR3EQ9NVU0 708 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 SNCAIPQ9Y6H5 919 aa15.19■□□□□ 0.02
ACER3-201ENST00000278544 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
ACER3-201ENST00000278544 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
ACER3-201ENST00000278544 SDF4Q9BRK5 362 aa15.18■□□□□ 0.02
ACER3-201ENST00000278544 CCPG1Q9ULG6 757 aa15.18■□□□□ 0.02
ACER3-201ENST00000278544 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
ACER3-201ENST00000278544 MARCH6O60337 910 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms