RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 CTAGE1Q96RT6 745 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 LZTFL1Q9NQ48 299 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
SEC16A-201ENST00000277537 BARHL2Q9NY43 387 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 PCDHAC2Q9Y5I4 1007 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 DDX39AO00148 427 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 IL1R1P14778 569 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 LONP1P36776 959 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 SP4Q02446 784 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 IQCB1Q15051 598 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 GALNT17Q6IS24 598 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 SYT10Q6XYQ8 523 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 CACNA2D4Q7Z3S7 1137 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 DHX40Q8IX18 779 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 PROM2Q8N271 834 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 DDX25Q9UHL0 483 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 RPN1P04843 607 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 HOXA13P31271 388 aaPredicted RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 CUL4BQ13620 913 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 KIAA1328Q86T90 577 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 ERMNQ8TAM6 284 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 SRRTQ9BXP5 876 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 SPAG1Q07617 926 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 MAP3K14Q99558 947 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 MMRN2Q9H8L6 949 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 SLC39A2Q9NP94 309 aa10.1□□□□□ -0.79
SEC16A-201ENST00000277537 DDX4Q9NQI0 724 aaKnown RBP10.1□□□□□ -0.79
SEC16A-201ENST00000277537 HOXA10P31260 410 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 CYP4A11Q02928 519 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 STRIP1Q5VSL9 837 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 NELFCDQ8IXH7 590 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 ADGRF4Q8IZF3 695 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 ZBTB9Q96C00 473 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 MAD2L2Q9UI95 211 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 DOT1LQ8TEK3 1739 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 AHDC1Q5TGY3 1603 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 CDC37Q16543 378 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 TMED8Q6PL24 325 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 CERS5Q8N5B7 392 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 PCDHA6Q9UN73 950 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 GDAQ9Y2T3 454 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 PCDHA8Q9Y5H6 950 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 RGL2O15211 777 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 PDHBP11177 359 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 CACNB1Q02641 598 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 TNIP1Q15025 636 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 KIF4BQ2VIQ3 1234 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 CRY2Q49AN0 593 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 HERC4Q5GLZ8 1057 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 RCSD1Q6JBY9 416 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 MAEAQ7L5Y9 396 aa10.09□□□□□ -0.79
SEC16A-201ENST00000277537 CCDC84Q86UT8 332 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 FOXP4Q8IVH2 680 aaPredicted RBP10.09□□□□□ -0.79
SEC16A-201ENST00000277537 PNMA6FA0A0J9YX94 578 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 POTEMA6NI47 508 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 F5H6K3 240 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TBCAO75347 108 aaKnown RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 BMP3P12645 472 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 PLCG1P19174 1290 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 DNA2P51530 1060 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 KLRC3Q07444 240 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TDRD12Q587J7 1177 aaKnown RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 NSMFQ6X4W1 530 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ZFPM1Q8IX07 1006 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 KIAA1524Q8TCG1 905 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 GJA10Q969M2 543 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 GSDMAQ96QA5 445 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 AMNQ9BXJ7 453 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 LRP6O75581 1613 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TRAF5O00463 557 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 PLSCR1O15162 318 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TDP2O95551 362 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 DPEP1P16444 411 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 SPECC1LQ69YQ0 1117 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 POTEDQ86YR6 584 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 RTKN2Q8IZC4 609 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 CAGE1Q8TC20 777 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TMEM60Q9H2L4 133 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ATRNO75882 1429 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 AKR1B15C9JRZ8 316 aaPredicted RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ATP2C1P98194 919 aaPredicted RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ARID5AQ03989 594 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 PRMT6Q96LA8 375 aaPredicted RBP10.08□□□□□ -0.8
SEC16A-201ENST00000277537 PRIMPOLQ96LW4 560 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 DESI2Q9BSY9 194 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 EHMT1Q9H9B1 1298 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 PIM2Q9P1W9 311 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 NHSL1Q5SYE7 1610 aa10.08□□□□□ -0.8
SEC16A-201ENST00000277537 DDTLA6NHG4 134 aaPredicted RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 RIOK3O14730 519 aaKnown RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 IKBKBO14920 756 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms