RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
UPF3B-201ENST00000276201 HHIPL1Q96JK4 782 aa11.68□□□□□ -0.54
UPF3B-201ENST00000276201 MYO1AQ9UBC5 1043 aa11.68□□□□□ -0.54
UPF3B-201ENST00000276201 MYO1CO00159 1063 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 IDH1O75874 414 aaKnown RBP11.67□□□□□ -0.54
UPF3B-201ENST00000276201 LDHCP07864 332 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 TNNI2P48788 182 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 RHBDL3P58872 404 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 CYP4F22Q6NT55 531 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
UPF3B-201ENST00000276201 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 SPATA20Q8TB22 786 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 DHX58Q96C10 678 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 L1RE1Q9UN81 338 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 FZD1Q9UP38 647 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 H3BQF6 201 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 PBX1P40424 430 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 PNOCQ13519 176 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 PRKG1Q13976 671 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 OTUD7BQ6GQQ9 843 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 TOGARAM2Q6ZUX3 1019 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-201ENST00000276201 APPBP2Q92624 585 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 OSBP2Q969R2 916 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 CAPNS2Q96L46 248 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 MAN1B1Q9UKM7 699 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 KCNH3Q9ULD8 1083 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 PCDHA5Q9Y5H7 936 aa11.67□□□□□ -0.54
UPF3B-201ENST00000276201 THSD7BQ9C0I4 1608 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
UPF3B-201ENST00000276201 WHAMMP3Q1A5X7 153 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 SUPT20HL1Q3ZLR7 823 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 KRT40Q6A162 431 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 FOXP4Q8IVH2 680 aaPredicted RBP11.66□□□□□ -0.54
UPF3B-201ENST00000276201 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
UPF3B-201ENST00000276201 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 FAM71BQ8TC56 605 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 YY1AP1Q9H869 796 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 VIPAS39Q9H9C1 493 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 ADGRG1Q9Y653 693 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 ITIH6Q6UXX5 1313 aa11.66□□□□□ -0.54
UPF3B-201ENST00000276201 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 AKR1B15C9JRZ8 316 aaPredicted RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 BMP6P22004 513 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 PLCD1P51178 756 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 TCP10Q12799 353 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 NOM1Q5C9Z4 860 aaKnown RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 FAM151AQ8WW52 585 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 TRIM34Q9BYJ4 488 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 ACBD3Q9H3P7 528 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 SH2B2O14492 632 aaPredicted RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 FGAP02671 866 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 CYP7A1P22680 504 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 PDE4BQ07343 736 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 GRM1Q13255 1194 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 LONRF3Q496Y0 759 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 RGMBQ6NW40 437 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 LEKR1Q6ZMV7 388 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 MAGEB6Q8N7X4 407 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 TMEM87BQ96K49 555 aa11.65□□□□□ -0.54
UPF3B-201ENST00000276201 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 ZCCHC17Q9NP64 241 aaKnown RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 RRP15Q9Y3B9 282 aaKnown RBP11.65□□□□□ -0.54
UPF3B-201ENST00000276201 KIF5CO60282 957 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 PTPREP23469 700 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
UPF3B-201ENST00000276201 ECE1P42892 770 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 NOP2P46087 812 aaKnown RBP11.64□□□□□ -0.55
UPF3B-201ENST00000276201 POSTNQ15063 836 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 SGMS1Q86VZ5 419 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 GOLGA6L1Q8N7Z2 621 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 SH3RF3Q8TEJ3 882 aaPredicted RBP11.64□□□□□ -0.55
UPF3B-201ENST00000276201 WASF1Q92558 559 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
UPF3B-201ENST00000276201 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
UPF3B-201ENST00000276201 AOC2O75106 756 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 PDE6AP16499 860 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 PPP4CP60510 307 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
UPF3B-201ENST00000276201 NTRK3Q16288 839 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
UPF3B-201ENST00000276201 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms