RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CAPS2Q9BXY5 557 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 TMOD3Q9NYL9 352 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 GRIN2DO15399 1336 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 RTL9Q8NET4 1388 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 ERCC3P19447 782 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 KRT83P78385 493 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 LRRC15Q8TF66 581 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 ERLIN2O94905 339 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 NAALADL2Q58DX5 795 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 CREG2Q8IUH2 290 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 SH2D3CQ8N5H7 860 aa20.87■□□□□ 0.93
SSC4D-201ENST00000275560 PDS5AQ29RF7 1337 aaKnown RBP20.87■□□□□ 0.93
SSC4D-201ENST00000275560 BAZ2AQ9UIF9 1905 aaKnown RBP20.87■□□□□ 0.93
SSC4D-201ENST00000275560 LOC102724159A0A0B4J2E5 919 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 PDE8AO60658 829 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 BMP15O95972 392 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 PWP2Q15269 919 aaKnown RBP20.86■□□□□ 0.93
SSC4D-201ENST00000275560 CCDC96Q2M329 555 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 KCTD16Q68DU8 428 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 NFRKBQ6P4R8 1299 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 TUBGCP2Q9BSJ2 902 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 PNPLA7Q6ZV29 1317 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 NCK2O43639 380 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 MOCS3O95396 460 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 FAM184BQ9ULE4 1060 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 FAM205AQ6ZU69 1335 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 CNTNAP5Q8WYK1 1306 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 EBAG9O00559 213 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 GNAT2P19087 354 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 ATP1A2P50993 1020 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 TBC1D8BQ0IIM8 1120 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 MEA1Q16626 185 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 TMTC3Q6ZXV5 915 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 ANKRD13CQ8N6S4 541 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 GPATCH11Q8N954 259 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 GPKOWQ92917 476 aaPredicted RBP eCLIP20.86■□□□□ 0.93
SSC4D-201ENST00000275560 TTYH3Q9C0H2 523 aa20.86■□□□□ 0.93
SSC4D-201ENST00000275560 CYLC1P35663 651 aaPredicted RBP20.85■□□□□ 0.93
SSC4D-201ENST00000275560 PDCLQ13371 301 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 TTMPQ5BVD1 217 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 SECISBP2LQ93073 1101 aaKnown RBP20.85■□□□□ 0.93
SSC4D-201ENST00000275560 HPS3Q969F9 1004 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 DEF6Q9H4E7 631 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 RMND1Q9NWS8 449 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 CPP00450 1065 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 PIGBQ92521 554 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 MAGEC2Q9UBF1 373 aaPredicted RBP20.85■□□□□ 0.93
SSC4D-201ENST00000275560 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
SSC4D-201ENST00000275560 IPO7O95373 1038 aaKnown RBP20.84■□□□□ 0.93
SSC4D-201ENST00000275560 CSGALNACT2Q8N6G5 542 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 DUSP9Q99956 384 aaKnown RBP20.84■□□□□ 0.93
SSC4D-201ENST00000275560 EXOC1Q9NV70 894 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 MYH3P11055 1940 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 TNS2Q63HR2 1409 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 A0A1W2PQC6 194 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 KLRC4O43908 158 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 SRGNP10124 158 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 ATF3P18847 181 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 KIF5AQ12840 1032 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 PPFIA1Q13136 1202 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 TYW1BQ6NUM6 668 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 MMS22LQ6ZRQ5 1243 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 TMEM60Q9H2L4 133 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 DISC1Q9NRI5 854 aa20.84■□□□□ 0.93
SSC4D-201ENST00000275560 ZNHIT6Q9NWK9 470 aaKnown RBP20.84■□□□□ 0.93
SSC4D-201ENST00000275560 EIF3HO15372 352 aaKnown RBP eCLIP20.83■□□□□ 0.93
SSC4D-201ENST00000275560 ZPR1O75312 459 aa20.83■□□□□ 0.93
SSC4D-201ENST00000275560 DNA2P51530 1060 aa20.83■□□□□ 0.93
SSC4D-201ENST00000275560 KCTD19Q17RG1 926 aaPredicted RBP20.83■□□□□ 0.93
SSC4D-201ENST00000275560 TTI2Q6NXR4 508 aa20.83■□□□□ 0.93
SSC4D-201ENST00000275560 RPGRIP1Q96KN7 1286 aa20.83■□□□□ 0.93
SSC4D-201ENST00000275560 SNX12Q9UMY4 172 aa20.83■□□□□ 0.93
SSC4D-201ENST00000275560 MROH5Q6ZUA9 1318 aa20.83■□□□□ 0.93
SSC4D-201ENST00000275560 MAGEB6P1A0A0J9YX57 407 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 EPHB6O15197 1021 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 RCAN1P53805 252 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 C4orf32Q8N8J7 132 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 SPATA4Q8NEY3 305 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 DOCK2Q92608 1830 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 BCORQ6W2J9 1755 aa20.83■□□□□ 0.92
SSC4D-201ENST00000275560 EEF1GP26641 437 aaKnown RBP20.82■□□□□ 0.92
SSC4D-201ENST00000275560 DNM2P50570 870 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 KCNV1Q6PIU1 500 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 EHBP1Q8NDI1 1231 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 ZSCAN5CA6NGD5 496 aaPredicted RBP20.82■□□□□ 0.92
SSC4D-201ENST00000275560 KRT14P02533 472 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 SCG2P13521 617 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 IL2RBP14784 551 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 CNOT6LQ96LI5 555 aaKnown RBP20.82■□□□□ 0.92
SSC4D-201ENST00000275560 ESYT3A0FGR9 886 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 STARD3NLO95772 234 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 MTIF2P46199 727 aaKnown RBP20.82■□□□□ 0.92
SSC4D-201ENST00000275560 ATP2B2Q01814 1243 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 NKX1-1Q15270 411 aaPredicted RBP20.82■□□□□ 0.92
SSC4D-201ENST00000275560 ANKRD40Q6AI12 368 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 MS4A14Q96JA4 679 aa20.82■□□□□ 0.92
SSC4D-201ENST00000275560 CCDC42Q96M95 316 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms