RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PNMA6FA0A0J9YX94 578 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 hCG_1642624A0A1W2PR95 340 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 SNAP25P60880 206 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 QRICH1Q2TAL8 776 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 HOMER1Q86YM7 354 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 MB21D1Q8N884 522 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 PIBF1Q8WXW3 757 aa19.92■□□□□ 0.78
SKP2-201ENST00000274254 COL11A1P12107 1806 aaPredicted RBP19.91■□□□□ 0.78
SKP2-201ENST00000274254 PPP1R11O60927 126 aaPredicted RBP19.91■□□□□ 0.78
SKP2-201ENST00000274254 DEXIO95424 95 aa19.91■□□□□ 0.78
SKP2-201ENST00000274254 AKAP17AQ02040 695 aaKnown RBP19.91■□□□□ 0.78
SKP2-201ENST00000274254 PFKFB3Q16875 520 aaPredicted RBP19.91■□□□□ 0.78
SKP2-201ENST00000274254 GTF3C2Q8WUA4 911 aaPredicted RBP19.91■□□□□ 0.78
SKP2-201ENST00000274254 DDX11Q96FC9 970 aa19.91■□□□□ 0.78
SKP2-201ENST00000274254 SEC63Q9UGP8 760 aaKnown RBP19.91■□□□□ 0.78
SKP2-201ENST00000274254 ZNF536O15090 1300 aa19.9■□□□□ 0.78
SKP2-201ENST00000274254 ATP2A1O14983 1001 aa19.9■□□□□ 0.78
SKP2-201ENST00000274254 ZBED4O75132 1171 aa19.9■□□□□ 0.78
SKP2-201ENST00000274254 OAZ1P54368 228 aa19.9■□□□□ 0.78
SKP2-201ENST00000274254 ZNF214Q9UL59 606 aaPredicted RBP19.9■□□□□ 0.78
SKP2-201ENST00000274254 SMC3Q9UQE7 1217 aa19.9■□□□□ 0.78
SKP2-201ENST00000274254 ADGRA2Q96PE1 1338 aa19.9■□□□□ 0.78
SKP2-201ENST00000274254 HSP90AA1P07900 732 aaKnown RBP19.89■□□□□ 0.77
SKP2-201ENST00000274254 SCG2P13521 617 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 SLC4A3P48751 1232 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 TMEM132BQ14DG7 1078 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 SMCR8Q8TEV9 937 aaPredicted RBP19.89■□□□□ 0.77
SKP2-201ENST00000274254 FOXD4L1Q9NU39 408 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 BTBD7Q9P203 1132 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 RBPJLQ9UBG7 517 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 SMCHD1A6NHR9 2005 aa19.89■□□□□ 0.77
SKP2-201ENST00000274254 CNMDO75829 334 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 ALDH1A1P00352 501 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 ICAM1P05362 532 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 GJB2P29033 226 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 GCLCP48506 637 aaPredicted RBP19.88■□□□□ 0.77
SKP2-201ENST00000274254 TAF1CQ15572 869 aaPredicted RBP19.88■□□□□ 0.77
SKP2-201ENST00000274254 CCDC174Q6PII3 467 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 AMNQ9BXJ7 453 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 TXNRD2Q9NNW7 524 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 RABGAP1Q9Y3P9 1069 aa19.88■□□□□ 0.77
SKP2-201ENST00000274254 WWC2Q6AWC2 1192 aa19.87■□□□□ 0.77
SKP2-201ENST00000274254 FBXO11Q86XK2 927 aa19.87■□□□□ 0.77
SKP2-201ENST00000274254 WASF1Q92558 559 aa19.87■□□□□ 0.77
SKP2-201ENST00000274254 AIFM3Q96NN9 605 aa19.87■□□□□ 0.77
SKP2-201ENST00000274254 RAVER2Q9HCJ3 691 aaKnown RBP19.87■□□□□ 0.77
SKP2-201ENST00000274254 PNMA2Q9UL42 364 aa19.87■□□□□ 0.77
SKP2-201ENST00000274254 hCG_1984214I3L0E3 225 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 CA12O43570 354 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 CPXCR1Q8N123 301 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 ZNF713Q8N859 430 aaPredicted RBP19.86■□□□□ 0.77
SKP2-201ENST00000274254 FAM184AQ8NB25 1140 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 GPKOWQ92917 476 aaPredicted RBP eCLIP19.86■□□□□ 0.77
SKP2-201ENST00000274254 AGBL1Q96MI9 1066 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 ALG1Q9BT22 464 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 TEX13BQ9BXU2 312 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 BARHL2Q9NY43 387 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 CTDP1Q9Y5B0 961 aaPredicted RBP19.86■□□□□ 0.77
SKP2-201ENST00000274254 STXBP3O00186 592 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 TLR2O60603 784 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 PEX10O60683 326 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 CRHR2Q13324 411 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 TYW1BQ6NUM6 668 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 HEATR3Q7Z4Q2 680 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 DNAJC5GQ8N7S2 189 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 SPRYD3Q8NCJ5 442 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 SHISA4Q96DD7 197 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 IPO9Q96P70 1041 aaKnown RBP19.86■□□□□ 0.77
SKP2-201ENST00000274254 PAGR1Q9BTK6 254 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 ZFYVE28Q9HCC9 887 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 MORF4L1Q9UBU8 362 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 CCPG1Q9ULG6 757 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 KIF3AQ9Y496 699 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 PCDHA1Q9Y5I3 950 aa19.86■□□□□ 0.77
SKP2-201ENST00000274254 STAT3P40763 770 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 TRAF1Q13077 416 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 ANKRD13CQ8N6S4 541 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 COA7Q96BR5 231 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 CFHR5Q9BXR6 569 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 SPATC1LQ9H0A9 340 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 SH3GLB2Q9NR46 395 aa19.85■□□□□ 0.77
SKP2-201ENST00000274254 TAL1P17542 331 aaPredicted RBP19.84■□□□□ 0.77
SKP2-201ENST00000274254 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 ERVK-24P63145 666 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 FAM110CQ1W6H9 321 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 Q3C1V9 767 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 USH1GQ495M9 461 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 SNRNP48Q6IEG0 339 aaKnown RBP19.84■□□□□ 0.77
SKP2-201ENST00000274254 RIOX2Q8IUF8 465 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 FAM177A1Q8N128 213 aaPredicted RBP19.84■□□□□ 0.77
SKP2-201ENST00000274254 VPS54Q9P1Q0 977 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 RIPK3Q9Y572 518 aa19.84■□□□□ 0.77
SKP2-201ENST00000274254 BCRP11274 1271 aa19.83■□□□□ 0.77
SKP2-201ENST00000274254 PLS1Q14651 629 aa19.83■□□□□ 0.77
SKP2-201ENST00000274254 PPP1R18Q6NYC8 613 aa19.83■□□□□ 0.77
SKP2-201ENST00000274254 C17orf99Q6UX52 265 aa19.83■□□□□ 0.77
SKP2-201ENST00000274254 GPRC5AQ8NFJ5 357 aa19.83■□□□□ 0.77
SKP2-201ENST00000274254 CWC22Q9HCG8 908 aaKnown RBP19.83■□□□□ 0.77
SKP2-201ENST00000274254 GJB4Q9NTQ9 266 aa19.83■□□□□ 0.77
SKP2-201ENST00000274254 DAXXQ9UER7 740 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms