RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 CYB5D1Q6P9G0 228 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 SMIM5Q71RC9 77 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 TRIM22Q8IYM9 498 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 FAXDC2Q96IV6 333 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 TRIM47Q96LD4 638 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 RBM12Q9NTZ6 932 aaKnown RBP14.28□□□□□ -0.12
HERC6-202ENST00000273960 L3MBTL1Q9Y468 752 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 RGPD2P0DJD1 1756 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 SMIM23A6NLE4 172 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 SNAP23O00161 211 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 KIF4AO95239 1232 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 GCFC2P16383 781 aaKnown RBP14.28□□□□□ -0.12
HERC6-202ENST00000273960 PAK1Q13153 545 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 HIBCHQ6NVY1 386 aaPredicted RBP14.28□□□□□ -0.12
HERC6-202ENST00000273960 MICAL1Q8TDZ2 1067 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 SPDL1Q96EA4 605 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 SH3GL2Q99962 352 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
HERC6-202ENST00000273960 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
HERC6-202ENST00000273960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.12
HERC6-202ENST00000273960 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
HERC6-202ENST00000273960 PSMD14O00487 310 aa14.27□□□□□ -0.12
HERC6-202ENST00000273960 TEX11Q8IYF3 940 aa14.27□□□□□ -0.12
HERC6-202ENST00000273960 NLRP3Q96P20 1036 aa14.27□□□□□ -0.12
HERC6-202ENST00000273960 DNM1LO00429 736 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 PPP1R37O75864 691 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
HERC6-202ENST00000273960 SPA17Q15506 151 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 QPCTQ16769 361 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 PREPLQ4J6C6 727 aaPredicted RBP14.27□□□□□ -0.13
HERC6-202ENST00000273960 CDKAL1Q5VV42 579 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 ARMC3Q5W041 872 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 CCDC24Q8N4L8 307 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.13
HERC6-202ENST00000273960 CALR3Q96L12 384 aaKnown RBP14.27□□□□□ -0.13
HERC6-202ENST00000273960 CCDC42Q96M95 316 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 EPN3Q9H201 632 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 MYO1AQ9UBC5 1043 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 PHF20L1A8MW92 1017 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 BUB1BO60566 1050 aaPredicted RBP14.27□□□□□ -0.13
HERC6-202ENST00000273960 VAV2P52735 878 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 ZBTB10Q96DT7 871 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 VCPKMTQ9H867 229 aa14.27□□□□□ -0.13
HERC6-202ENST00000273960 FAM207AQ9NSI2 230 aaPredicted RBP14.27□□□□□ -0.13
HERC6-202ENST00000273960 A0A1B0GUA9 196 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 TRIM75PA6NK02 468 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 SH2B2O14492 632 aaPredicted RBP14.26□□□□□ -0.13
HERC6-202ENST00000273960 FSBPO95073 299 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 GLI1P08151 1106 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 MCM7P33993 719 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 PAFAH1B1P43034 410 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 PTGISQ16647 500 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 WDR59Q6PJI9 974 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 CHD2O14647 1828 aaKnown RBP14.26□□□□□ -0.13
HERC6-202ENST00000273960 HEXIM1O94992 359 aaKnown RBP14.26□□□□□ -0.13
HERC6-202ENST00000273960 PMS1P54277 932 aaKnown RBP14.26□□□□□ -0.13
HERC6-202ENST00000273960 ARID5AQ03989 594 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 EGFL6Q8IUX8 553 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 CCDC51Q96ER9 411 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 XAGE2Q96GT9 111 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 KRT12Q99456 494 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 ZBTB1Q9Y2K1 713 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
HERC6-202ENST00000273960 KDM4FA0A1W2PPD8 638 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 PPP1R12AO14974 1030 aaPredicted RBP14.25□□□□□ -0.13
HERC6-202ENST00000273960 AKR1B10O60218 316 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 MMP1P03956 469 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 KRT83P78385 493 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 HLFQ16534 295 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 MSL1Q68DK7 614 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 IQCEQ6IPM2 695 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 KANK3Q6NY19 840 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 FAM228AQ86W67 206 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 AMOTL1Q8IY63 956 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 STAMBPL1Q96FJ0 436 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 FAM167BQ9BTA0 163 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 FAM217BQ9NTX9 383 aaPredicted RBP14.25□□□□□ -0.13
HERC6-202ENST00000273960 ZSWIM5Q9P217 1185 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 STIM2Q9P246 746 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 CYLC1P35663 651 aaPredicted RBP14.25□□□□□ -0.13
HERC6-202ENST00000273960 PRCPP42785 496 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 RTN1Q16799 776 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 CPLX4Q7Z7G2 160 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 DDX42Q86XP3 938 aaKnown RBP eCLIP14.25□□□□□ -0.13
HERC6-202ENST00000273960 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 CYFIP2Q96F07 1278 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 MAGEC2Q9UBF1 373 aaPredicted RBP14.25□□□□□ -0.13
HERC6-202ENST00000273960 HEG1Q9ULI3 1381 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 GOLGA6L10A6NI86 522 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 NKRFO15226 690 aaKnown RBP eCLIP14.25□□□□□ -0.13
HERC6-202ENST00000273960 EPHB4P54760 987 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 PAPD7Q5XG87 772 aaKnown RBP14.25□□□□□ -0.13
HERC6-202ENST00000273960 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
HERC6-202ENST00000273960 CREG2Q8IUH2 290 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms