RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 REPIN1Q9BWE0 567 aaKnown RBP8.55□□□□□ -1.04
CDH13-201ENST00000268613 KCTD10Q9H3F6 313 aa8.55□□□□□ -1.04
CDH13-201ENST00000268613 DBNDD1Q9H9R9 158 aa8.55□□□□□ -1.04
CDH13-201ENST00000268613 NLRP2Q9NX02 1062 aa8.55□□□□□ -1.04
CDH13-201ENST00000268613 LAMP5Q9UJQ1 280 aa8.55□□□□□ -1.04
CDH13-201ENST00000268613 VIRMAQ69YN4 1812 aaKnown RBP8.55□□□□□ -1.04
CDH13-201ENST00000268613 FAM208AQ9UK61 1670 aaKnown RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 SPDYE2BA6NHP3 402 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 SPDYE5A6NIY4 337 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 NMT2O60551 498 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 SPDYE6P0CI01 402 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 ZSCAN22P10073 491 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 CD9P21926 228 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 TCF7P36402 384 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 MTHFRP42898 656 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 PEX5P50542 639 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 MLLT1Q03111 559 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 IMMTQ16891 758 aaKnown RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 SKOR2Q2VWA4 1001 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 SPDYE2Q495Y8 402 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 GOT1L1Q8NHS2 421 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 FNBP1Q96RU3 617 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 SLC16A2P36021 539 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 SARSP49591 514 aaKnown RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 NEK3P51956 506 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 MRPS35P82673 323 aaKnown RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 BBS9Q3SYG4 887 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 HIBCHQ6NVY1 386 aaPredicted RBP8.54□□□□□ -1.04
CDH13-201ENST00000268613 IQCA1Q86XH1 822 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 FAM81AQ8TBF8 368 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 GLT8D2Q9H1C3 349 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 C12orf49Q9H741 205 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 PCDHGB3Q9Y5G1 929 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 USP47Q96K76 1375 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 PIK3C2AO00443 1686 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
CDH13-201ENST00000268613 KRBA1A5PL33 1030 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 CDC25CP30307 473 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 S100A5P33763 92 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 NOS2P35228 1153 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 TUFMP49411 452 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 SMAD4Q13485 552 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 MRPL58Q14197 206 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 ERC1Q8IUD2 1116 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 LURAP1LQ8IV03 231 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 TRIML2Q8N7C3 387 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 SMYD1Q8NB12 490 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 EXOC4Q96A65 974 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDH13-201ENST00000268613 CARD11Q9BXL7 1154 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 GPR108Q9NPR9 543 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 NDFIP2Q9NV92 336 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 HERC5Q9UII4 1024 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 TTC21AQ8NDW8 1320 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 PRR36Q9H6K5 1346 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 LMO7Q8WWI1 1683 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ENPP3O14638 875 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 GPR37O15354 613 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ALDH1L1O75891 902 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 BOLA3Q53S33 107 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 DGLUCYQ7Z3D6 616 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 CKAP2LQ8IYA6 745 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 CARNMT1Q8N4J0 409 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 STK32AQ8WU08 396 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ZMAT2Q96NC0 199 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 CDK19Q9BWU1 502 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 NACAP1Q9BZK3 213 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ZCCHC17Q9NP64 241 aaKnown RBP8.53□□□□□ -1.04
CDH13-201ENST00000268613 HOMER2Q9NSB8 354 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 ZNF69Q9UC07 566 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 CROTQ9UKG9 612 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 USP6P35125 1406 aa8.53□□□□□ -1.04
CDH13-201ENST00000268613 NEK2P51955 445 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 GPS2Q13227 327 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 Q4G0T1 1027 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 RILPL1Q5EBL4 403 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 DSTYKQ6XUX3 929 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 GRAMD2AQ8IUY3 354 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 NKAIN3Q8N8D7 197 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 LRRC45Q96CN5 670 aa8.52□□□□□ -1.04
CDH13-201ENST00000268613 NTPCRQ9BSD7 190 aaKnown RBP8.52□□□□□ -1.04
CDH13-201ENST00000268613 PPP1R12CQ9BZL4 782 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms