RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 ITGA6P23229 1130 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 TRAPPC10P48553 1259 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 PDE6CP51160 858 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 MTMR3Q13615 1198 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 ADAT2Q7Z6V5 191 aaKnown RBP13.78□□□□□ -0.2
CDH11-201ENST00000268603 COG4Q9H9E3 785 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 HIP1RO75146 1068 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 PDE1BQ01064 536 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 CCNYQ8ND76 341 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 GRK7Q8WTQ7 553 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 TEKT4Q8WW24 435 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 FAM160B1Q5W0V3 765 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 RAB17Q9H0T7 212 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 SLC38A10Q9HBR0 1119 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 NLRC4Q9NPP4 1024 aa13.78□□□□□ -0.2
CDH11-201ENST00000268603 A6NNZ2 444 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 THOC5Q13769 683 aaKnown RBP13.77□□□□□ -0.2
CDH11-201ENST00000268603 TUBB8Q3ZCM7 444 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 CHURC1Q8WUH1 139 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 ABCC5O15440 1437 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 ALDH1B1P30837 517 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 SNX19Q92543 992 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 YIPF2Q9BWQ6 316 aa13.77□□□□□ -0.2
CDH11-201ENST00000268603 FRMPD2Q68DX3 1309 aaPredicted RBP13.77□□□□□ -0.2
CDH11-201ENST00000268603 DPYSL4O14531 572 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 SART1O43290 800 aaKnown RBP13.77□□□□□ -0.21
CDH11-201ENST00000268603 YWHAGP61981 247 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDH11-201ENST00000268603 TMED1Q13445 227 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 AP1ARQ63HQ0 302 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 SRPK1Q96SB4 655 aaKnown RBP13.77□□□□□ -0.21
CDH11-201ENST00000268603 PRDM5Q9NQX1 630 aaPredicted RBP13.77□□□□□ -0.21
CDH11-201ENST00000268603 KLHL14Q9P2G3 628 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 TAF5LO75529 589 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 BFSP1Q12934 665 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 PAK2Q13177 524 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.21
CDH11-201ENST00000268603 OSBPP22059 807 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 EEF1DP29692 281 aaKnown RBP13.77□□□□□ -0.21
CDH11-201ENST00000268603 GUCY2FP51841 1108 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 RRAGAQ7L523 313 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 TMCO5AQ8N6Q1 288 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 FAM89AQ96GI7 184 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 MIS12Q9H081 205 aa13.77□□□□□ -0.21
CDH11-201ENST00000268603 HLA-DPA1P20036 260 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 CFAP221Q4G0U5 840 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 FAM149B1Q96BN6 582 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 NEMP1O14524 444 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 ACTN1P12814 892 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 DMP1Q13316 513 aaPredicted RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 TTF2Q9UNY4 1162 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 THAP12O43422 761 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 PPP2R5EQ16537 467 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 TTLL7Q6ZT98 887 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 CDV3Q9UKY7 258 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 H3BRJ5 948 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 AK2P54819 239 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 RCN2Q14257 317 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 PPP1R16BQ96T49 567 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 BLZF1Q9H2G9 400 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 BMP2KLQ5H9B9 411 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 IFNA8P32881 189 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 DNAAF3Q8N9W5 541 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
CDH11-201ENST00000268603 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 NRBP2Q9NSY0 501 aa13.76□□□□□ -0.21
CDH11-201ENST00000268603 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 F8W8V4 182 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 FBLN1P23142 703 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 LONP1P36776 959 aaKnown RBP13.75□□□□□ -0.21
CDH11-201ENST00000268603 PSMD2Q13200 908 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
CDH11-201ENST00000268603 FAM207AQ9NSI2 230 aaPredicted RBP13.75□□□□□ -0.21
CDH11-201ENST00000268603 PDE1AP54750 535 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms