RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HDAC7Q8WUI4 952 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 SLC39A2Q9NP94 309 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 IL17RBQ9NRM6 502 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 TECP42680 631 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 TSR1Q2NL82 804 aaKnown RBP18.85■□□□□ 0.61
SQLE-201ENST00000265896 OR8K1Q8NGG5 319 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 MKNK2Q9HBH9 465 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 DISC1Q9NRI5 854 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 FEZ2Q9UHY8 353 aaPredicted RBP18.85■□□□□ 0.61
SQLE-201ENST00000265896 ERLIN1O75477 346 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 MTIF2P46199 727 aaKnown RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 RNASE9P60153 205 aaKnown RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 TBC1D8BQ0IIM8 1120 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 ELOA2Q8IYF1 753 aaPredicted RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 EHD4Q9H223 541 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 USP5P45974 858 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 ASIC1P78348 528 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 PFKFB3Q16875 520 aaPredicted RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 MLXIPQ9HAP2 919 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 CYTH3O43739 400 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 EIF6P56537 245 aaKnown RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 MAPKAPK5Q8IW41 473 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 TUBGCP2Q9BSJ2 902 aa18.84■□□□□ 0.61
SQLE-201ENST00000265896 RBM28Q9NW13 759 aaKnown RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 MAGEC2Q9UBF1 373 aaPredicted RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 DDX60Q8IY21 1712 aaKnown RBP18.84■□□□□ 0.61
SQLE-201ENST00000265896 LRP6O75581 1613 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 EPHB6O15197 1021 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 CCNT1O60563 726 aaKnown RBP18.83■□□□□ 0.61
SQLE-201ENST00000265896 PLCG1P19174 1290 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 PDE4DQ08499 809 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 TXNRD1Q16881 649 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 ANKRD40Q6AI12 368 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 JAKMIP2Q96AA8 810 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 LRWD1Q9UFC0 647 aa18.83■□□□□ 0.61
SQLE-201ENST00000265896 AMPD2Q01433 879 aa18.83■□□□□ 0.6
SQLE-201ENST00000265896 LRRC41Q15345 812 aa18.83■□□□□ 0.6
SQLE-201ENST00000265896 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
SQLE-201ENST00000265896 DZIP1Q86YF9 867 aaKnown RBP18.83■□□□□ 0.6
SQLE-201ENST00000265896 ADSSL1Q8N142 457 aa18.83■□□□□ 0.6
SQLE-201ENST00000265896 GLIS3Q8NEA6 775 aa18.83■□□□□ 0.6
SQLE-201ENST00000265896 ZNF142P52746 1687 aaPredicted RBP18.83■□□□□ 0.6
SQLE-201ENST00000265896 MYO1CO00159 1063 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 NCK2O43639 380 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 IDEP14735 1019 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 APBA1Q02410 837 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 CCDC96Q2M329 555 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 LEKR1Q6ZMV7 388 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 C4orf32Q8N8J7 132 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 CCDC148Q8NFR7 591 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 SAR1BQ9Y6B6 198 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 CLEC10AQ8IUN9 316 aa18.82■□□□□ 0.6
SQLE-201ENST00000265896 NHEJ1Q9H9Q4 299 aaPredicted RBP18.82■□□□□ 0.6
SQLE-201ENST00000265896 RASSF10A6NK89 507 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 RNF40O75150 1001 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 DNAAF5Q86Y56 855 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 MSANTD4Q8NCY6 345 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 SH3RF3Q8TEJ3 882 aaPredicted RBP18.81■□□□□ 0.6
SQLE-201ENST00000265896 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
SQLE-201ENST00000265896 BIN2Q9UBW5 565 aaPredicted RBP18.81■□□□□ 0.6
SQLE-201ENST00000265896 ANAPC4Q9UJX5 808 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 MYH6P13533 1939 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 ATP8B1O43520 1251 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 TXKP42681 527 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 RAB21Q9UL25 225 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 ACTN2P35609 894 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 DDB1Q16531 1140 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 TBC1D9BQ66K14 1250 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 RRP36Q96EU6 259 aaKnown RBP18.81■□□□□ 0.6
SQLE-201ENST00000265896 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
SQLE-201ENST00000265896 NOC4LQ9BVI4 516 aaKnown RBP18.81■□□□□ 0.6
SQLE-201ENST00000265896 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 PCDHA6Q9UN73 950 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 PCDHA8Q9Y5H6 950 aa18.81■□□□□ 0.6
SQLE-201ENST00000265896 CHD4Q14839 1912 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 SLURP2P0DP57 97 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 ARID5AQ03989 594 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 C2CD5Q86YS7 1000 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 CERS3Q8IU89 383 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 COG1Q8WTW3 980 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 TBC1D7Q9P0N9 293 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 PARP4Q9UKK3 1724 aaKnown RBP18.8■□□□□ 0.6
SQLE-201ENST00000265896 NUP98P52948 1817 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 LRRC10BA6NIK2 292 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 LGALS16A8MUM7 142 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 MOCS3O95396 460 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 TSPY3P0CV98 308 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 TSPY8P0CW00 308 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 HIBADHP31937 336 aaKnown RBP18.8■□□□□ 0.6
SQLE-201ENST00000265896 GGCXP38435 758 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 NAP1L1P55209 391 aaKnown RBP18.8■□□□□ 0.6
SQLE-201ENST00000265896 EXOC4Q96A65 974 aa18.8■□□□□ 0.6
SQLE-201ENST00000265896 DUSP9Q99956 384 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms