RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TRAF5O00463 557 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 ARMC9Q7Z3E5 817 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 NT5C3AQ9H0P0 336 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 MYOZ2Q9NPC6 264 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 PRAMEF18Q5VWM3 479 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 FAM151AQ8WW52 585 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 TMEM39BQ9GZU3 492 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 ZSCAN12O43309 604 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 PTPN14Q15678 1187 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 TRMT44Q8IYL2 757 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 PNMA2Q9UL42 364 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 NFE2L3Q9Y4A8 694 aa16.22■□□□□ 0.19
PDLIM2-201ENST00000265810 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 GAS2L3Q86XJ1 694 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 SLFN12Q8IYM2 578 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 AGBL3Q8NEM8 1001 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 USP8P40818 1118 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 CXCL9Q07325 125 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 NOP56O00567 594 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 CYP4A11Q02928 519 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 KRT26Q7Z3Y9 468 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 ADGRF4Q8IZF3 695 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 FAM205AQ6ZU69 1335 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
PDLIM2-201ENST00000265810 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.18
PDLIM2-201ENST00000265810 PCDHA5Q9Y5H7 936 aa16.21■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 SORBS3O60504 671 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 ATRNO75882 1429 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 UBXN1Q04323 297 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 ANGEL2Q5VTE6 544 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 USP17L6PQ6QN14 398 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 MIER3Q7Z3K6 550 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 PROM2Q8N271 834 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 STK24Q9Y6E0 443 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 PAK1Q13153 545 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 GRIK5Q16478 980 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 HPS5Q9UPZ3 1129 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 KIF28PB7ZC32 967 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 SKILP12757 684 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 KRT13P13646 458 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 GNPTABQ3T906 1256 aa16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.2■□□□□ 0.18
PDLIM2-201ENST00000265810 LAD1O00515 517 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 CSGALNACT2Q8N6G5 542 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 SRPRBQ9Y5M8 271 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 A0A087WWV3 80 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 CCDC169A6NNP5 214 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 FDPSP14324 419 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 VPS16Q9H269 839 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 BARHL2Q9NY43 387 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 VPS36Q86VN1 386 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 SLC10A4Q96EP9 437 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
PDLIM2-201ENST00000265810 KDM3AQ9Y4C1 1321 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 GCFC2P16383 781 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 PTGS1P23219 599 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 PPP1R2P41236 205 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 RASSF7Q02833 373 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 ANO3Q9BYT9 981 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 GGA3Q9NZ52 723 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 ERCC3P19447 782 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 FANCCQ00597 558 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 TROAPQ12815 778 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 GPBP1Q86WP2 473 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 NELFCDQ8IXH7 590 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 MYCT1Q8N699 235 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 DKC1O60832 514 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 GRAMD1CQ8IYS0 662 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 TMEM87AQ8NBN3 555 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 KIAA1024Q9UPX6 916 aa16.18■□□□□ 0.18
PDLIM2-201ENST00000265810 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms