RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 GLT8D2Q9H1C3 349 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 EHMT1Q9H9B1 1298 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 TMEM260Q9NX78 707 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 IRS2Q9Y4H2 1338 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 TPM2P07951 284 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 QRICH1Q2TAL8 776 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
SSR3-201ENST00000265044 SHC4Q6S5L8 630 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 C7orf43Q8WVR3 580 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 MAP3K14Q99558 947 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 PCDHA5Q9Y5H7 936 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 OR52Z1P0C646 297 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 AMPD3Q01432 767 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 KARSQ15046 597 aaKnown RBP10.54□□□□□ -0.72
SSR3-201ENST00000265044 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
SSR3-201ENST00000265044 NYAP2Q9P242 653 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 SAMM50Q9Y512 469 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 CYTH3O43739 400 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 ALAS1P13196 640 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 ECE1P42892 770 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 ASIC1P78348 528 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 FILIP1LQ4L180 1135 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 ANGEL2Q5VTE6 544 aaKnown RBP10.53□□□□□ -0.72
SSR3-201ENST00000265044 NSMFQ6X4W1 530 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 NLGN2Q8NFZ4 835 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 WRNIP1Q96S55 665 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 DEFB129Q9H1M3 183 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 EHD4Q9H223 541 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 PKD2L1Q9P0L9 805 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 SBF2Q86WG5 1849 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 TPM1P09493 284 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 SHROOM1Q2M3G4 852 aaPredicted RBP10.53□□□□□ -0.72
SSR3-201ENST00000265044 ZBTB21Q9ULJ3 1066 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 COL4A1P02462 1669 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 MYH7P12883 1935 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 CLSTN1O94985 981 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 HOXA13P31271 388 aaPredicted RBP10.53□□□□□ -0.72
SSR3-201ENST00000265044 TOB1P50616 345 aaPredicted RBP10.53□□□□□ -0.72
SSR3-201ENST00000265044 GRIN1Q05586 938 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 PRR16Q569H4 304 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 TMOD4Q9NZQ9 345 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
SSR3-201ENST00000265044 HACL1Q9UJ83 578 aa10.53□□□□□ -0.72
SSR3-201ENST00000265044 STXBP3O00186 592 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 PPP1R12BO60237 982 aaPredicted RBP10.52□□□□□ -0.73
SSR3-201ENST00000265044 UBXN2AP68543 259 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 SPP2Q13103 211 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 EARS2Q5JPH6 523 aaKnown RBP10.52□□□□□ -0.73
SSR3-201ENST00000265044 USP49Q70CQ1 688 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 CABP7Q86V35 215 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 FAM43AQ8N2R8 423 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 SNX29Q8TEQ0 813 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 ANKS1AQ92625 1134 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.73
SSR3-201ENST00000265044 PCDHA6Q9UN73 950 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 PCDHA8Q9Y5H6 950 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 SHTN1A0MZ66 631 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 RESP18Q5W5W9 173 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
SSR3-201ENST00000265044 PCDHA12Q9UN75 941 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 BCORQ6W2J9 1755 aa10.52□□□□□ -0.73
SSR3-201ENST00000265044 TNRC6CQ9HCJ0 1690 aaKnown RBP10.52□□□□□ -0.73
SSR3-201ENST00000265044 hCG_1984214I3L0E3 225 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 RPS12P25398 132 aaKnown RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 NLRP12P59046 1061 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 GABPAQ06546 454 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 SUPT20HL1Q3ZLR7 823 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 C11orf57Q6ZUT1 292 aaPredicted RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 ZNF713Q8N859 430 aaPredicted RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 GGA3Q9NZ52 723 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 DDX25Q9UHL0 483 aaKnown RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 CCPG1Q9ULG6 757 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 LY75O60449 1722 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 CHMP2AO43633 222 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 LMNB1P20700 586 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 AXDND1Q5T1B0 1012 aaPredicted RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 UPF1Q92900 1129 aaKnown RBP eCLIP10.51□□□□□ -0.735e-13■■■■■ 94.7
SSR3-201ENST00000265044 VPS33BQ9H267 617 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 TTC12Q9H892 705 aaPredicted RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 EXOC1Q9NV70 894 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 CSADQ9Y600 493 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 ZHX2Q9Y6X8 837 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 UBR3Q6ZT12 1888 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 TAF1LQ8IZX4 1826 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 LRP5O75197 1615 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 CBFA2T2O43439 604 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 ZBED4O75132 1171 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 LONP1P36776 959 aaKnown RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 CCT6AP40227 531 aaKnown RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 PTPAQ15257 358 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms