RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 FAM182BQ5T319 152 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 FAM76AQ8TAV0 307 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 PGBD1Q96JS3 809 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 RSPH14Q9UHP6 348 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 SAR1BQ9Y6B6 198 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 XRCC5P13010 732 aaKnown RBP18.53■□□□□ 0.56
PHRF1-201ENST00000264555 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.53■□□□□ 0.56
PHRF1-201ENST00000264555 BCRP11274 1271 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 IFT20Q8IY31 132 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 CALCOCO2Q13137 446 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 DIXDC1Q155Q3 683 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 DHTKD1Q96HY7 919 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-201ENST00000264555 AMNQ9BXJ7 453 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 A0A1W2PRG0 241 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 SPOPO43791 374 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 MYCNP04198 464 aaPredicted RBP18.53■□□□□ 0.56
PHRF1-201ENST00000264555 CALRP27797 417 aaKnown RBP18.53■□□□□ 0.56
PHRF1-201ENST00000264555 FAM26FQ5R3K3 315 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 UTP14CQ5TAP6 766 aaKnown RBP18.53■□□□□ 0.56
PHRF1-201ENST00000264555 ATRIPQ8WXE1 791 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 HAUS4Q9H6D7 363 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 RIPOR2Q9Y4F9 1068 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 PCDHB13Q9Y5F0 798 aa18.53■□□□□ 0.56
PHRF1-201ENST00000264555 TMEM232C9JQI7 657 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 PLCB3Q01970 1234 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 TRIM58Q8NG06 486 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 LSM14BQ9BX40 385 aaKnown RBP18.52■□□□□ 0.56
PHRF1-201ENST00000264555 UTYO14607 1347 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 SNAP23O00161 211 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 EEF1GP26641 437 aaKnown RBP18.52■□□□□ 0.56
PHRF1-201ENST00000264555 PPP1R7Q15435 360 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 CFAP221Q4G0U5 840 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 ZNF658Q5TYW1 1059 aaPredicted RBP18.52■□□□□ 0.56
PHRF1-201ENST00000264555 ZNF215Q9UL58 517 aaPredicted RBP18.52■□□□□ 0.56
PHRF1-201ENST00000264555 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 OVOS2A0A0G2JMS6 1433 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 DIP2BQ9P265 1576 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 RESP18Q5W5W9 173 aa18.52■□□□□ 0.56
PHRF1-201ENST00000264555 NSRP1Q9H0G5 558 aaKnown RBP18.52■□□□□ 0.56
PHRF1-201ENST00000264555 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.55
PHRF1-201ENST00000264555 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.55
PHRF1-201ENST00000264555 GRAMD1CQ8IYS0 662 aa18.52■□□□□ 0.55
PHRF1-201ENST00000264555 SYCE1Q8N0S2 351 aa18.52■□□□□ 0.55
PHRF1-201ENST00000264555 PPP1R13BQ96KQ4 1090 aa18.52■□□□□ 0.55
PHRF1-201ENST00000264555 CPDO75976 1380 aa18.52■□□□□ 0.55
PHRF1-201ENST00000264555 TCP10L2B9ZVM9 353 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 MIER3Q7Z3K6 550 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 IWS1Q96ST2 819 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 ARMCX3Q9UH62 379 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-201ENST00000264555 UBL4BQ8N7F7 174 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 LARP4BQ92615 738 aaKnown RBP18.51■□□□□ 0.55
PHRF1-201ENST00000264555 PIGSQ96S52 555 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-201ENST00000264555 TRIM37O94972 964 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 GCFC2P16383 781 aaKnown RBP18.51■□□□□ 0.55
PHRF1-201ENST00000264555 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
PHRF1-201ENST00000264555 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 TBCKQ8TEA7 893 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 LY9Q9HBG7 655 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 CLEC11AQ9Y240 323 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 EFCAB8A8MWE9 144 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 KANSL2Q9H9L4 492 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 SH3GLB2Q9NR46 395 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 KCNG1Q9UIX4 513 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 CASP14P31944 242 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 GJB4Q9NTQ9 266 aa18.51■□□□□ 0.55
PHRF1-201ENST00000264555 RPS6KA1Q15418 735 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 EPN1Q9Y6I3 576 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-201ENST00000264555 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-201ENST00000264555 TUBGCP2Q9BSJ2 902 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 KIF4AO95239 1232 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 RNASE9P60153 205 aaKnown RBP18.5■□□□□ 0.55
PHRF1-201ENST00000264555 SARM1Q6SZW1 724 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 TSC1Q92574 1164 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
PHRF1-201ENST00000264555 EXOSC10Q01780 885 aaKnown RBP18.5■□□□□ 0.55
PHRF1-201ENST00000264555 SCARF1Q14162 830 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 GPIHBP1Q8IV16 184 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 GOLGA5Q8TBA6 731 aa18.5■□□□□ 0.55
PHRF1-201ENST00000264555 USP17L3A6NCW0 530 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 USP17L4A6NCW7 530 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 PTPREP23469 700 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 ERCC6LQ2NKX8 1250 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 USP17L1Q7RTZ2 530 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 PAGE5Q96GU1 130 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 CNOT6LQ96LI5 555 aaKnown RBP18.49■□□□□ 0.55
PHRF1-201ENST00000264555 HARSP12081 509 aaKnown RBP18.49■□□□□ 0.55
PHRF1-201ENST00000264555 CDK8P49336 464 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 BRD3Q15059 726 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 PDIA6Q15084 440 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 NLRX1Q86UT6 975 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 CEP104O60308 925 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms