RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 IL25Q9H293 177 aa18.93■□□□□ 0.62
USE1-201ENST00000263897 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
USE1-201ENST00000263897 NEDD4P46934 1319 aa18.93■□□□□ 0.62
USE1-201ENST00000263897 SNAI1O95863 264 aaPredicted RBP18.92■□□□□ 0.62
USE1-201ENST00000263897 ZNF865P0CJ78 1059 aaPredicted RBP18.92■□□□□ 0.62
USE1-201ENST00000263897 SNAP25P60880 206 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 LRRC26Q2I0M4 334 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
USE1-201ENST00000263897 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 DGKHQ86XP1 1220 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 TRERF1Q96PN7 1200 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 PRO3102Q9H379 93 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 ACAD9Q9H845 621 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 RBM27Q9P2N5 1060 aaKnown RBP18.92■□□□□ 0.62
USE1-201ENST00000263897 CNPY2Q9Y2B0 182 aa18.92■□□□□ 0.62
USE1-201ENST00000263897 KDM4AO75164 1064 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 ALAS1P13196 640 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 CHMLP26374 656 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 SLC16A2P36021 539 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 CCDC178Q5BJE1 867 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 ZKSCAN3Q9BRR0 538 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 GPCPD1Q9NPB8 672 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 SYNGAP1Q96PV0 1343 aa18.91■□□□□ 0.62
USE1-201ENST00000263897 SNHG28P0DPA3 235 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 RARBP10826 455 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 PDHBP11177 359 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 LRRC41Q15345 812 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 SYDE2Q5VT97 1194 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 IQCA1Q86XH1 822 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 ANKS1AQ92625 1134 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 FGD4Q96M96 766 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 RANBP17Q9H2T7 1088 aaKnown RBP18.9■□□□□ 0.62
USE1-201ENST00000263897 ZSWIM5Q9P217 1185 aa18.9■□□□□ 0.62
USE1-201ENST00000263897 ZMYND8Q9ULU4 1186 aaPredicted RBP18.9■□□□□ 0.62
USE1-201ENST00000263897 FRMPD2Q68DX3 1309 aaPredicted RBP18.9■□□□□ 0.62
USE1-201ENST00000263897 LAMA4Q16363 1823 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 B4E1Z4 1266 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 KBTBD13C9JR72 458 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 ICAM1P05362 532 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 AKR1A1P14550 325 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 CNTN2Q02246 1040 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 ZNF543Q08ER8 600 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 KRT23Q9C075 422 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.61
USE1-201ENST00000263897 FAM184BQ9ULE4 1060 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 RAD50Q92878 1312 aa18.89■□□□□ 0.61
USE1-201ENST00000263897 MYCNP04198 464 aaPredicted RBP18.88■□□□□ 0.61
USE1-201ENST00000263897 FXR1P51114 621 aaKnown RBP eCLIP18.88■□□□□ 0.61
USE1-201ENST00000263897 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
USE1-201ENST00000263897 ZSCAN10Q96SZ4 725 aaPredicted RBP18.88■□□□□ 0.61
USE1-201ENST00000263897 CNNM2Q9H8M5 875 aa18.88■□□□□ 0.61
USE1-201ENST00000263897 XPNPEP3Q9NQH7 507 aa18.88■□□□□ 0.61
USE1-201ENST00000263897 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.88■□□□□ 0.61
USE1-201ENST00000263897 CCPG1Q9ULG6 757 aa18.88■□□□□ 0.61
USE1-201ENST00000263897 MCM3APO60318 1980 aa18.88■□□□□ 0.61
USE1-201ENST00000263897 SOWAHBA6NEL2 793 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 SYN1P17600 705 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 ADCYAP1R1P41586 468 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 ATN1P54259 1190 aaPredicted RBP18.87■□□□□ 0.61
USE1-201ENST00000263897 ACVR2BQ13705 512 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 SLC39A5Q6ZMH5 540 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 GDF15Q99988 308 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 ABHD16BQ9H3Z7 469 aa18.87■□□□□ 0.61
USE1-201ENST00000263897 PGK1P00558 417 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 BMP8BP34820 402 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 PTH1RQ03431 593 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
USE1-201ENST00000263897 ARMCX2Q7L311 632 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 RNF180Q86T96 592 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 ENAHQ8N8S7 591 aaPredicted RBP18.86■□□□□ 0.61
USE1-201ENST00000263897 PNMA1Q8ND90 353 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 KAT14Q9H8E8 782 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 CYP39A1Q9NYL5 469 aa18.86■□□□□ 0.61
USE1-201ENST00000263897 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
USE1-201ENST00000263897 SGSM2O43147 1006 aa18.85■□□□□ 0.61
USE1-201ENST00000263897 FERMT2Q96AC1 680 aa18.85■□□□□ 0.61
USE1-201ENST00000263897 PNMA2Q9UL42 364 aa18.85■□□□□ 0.61
USE1-201ENST00000263897 PHF24Q9UPV7 400 aa18.85■□□□□ 0.61
USE1-201ENST00000263897 TNKSO95271 1327 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 A0A1W2PPC1 479 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 ASB14A6NK59 587 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 DUSP11O75319 330 aaKnown RBP18.84■□□□□ 0.61
USE1-201ENST00000263897 GOLGA8HP0CJ92 632 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 RTP1P59025 263 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 CCDC144BQ3MJ40 725 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 NSMFQ6X4W1 530 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 LENG1Q96BZ8 264 aaPredicted RBP18.84■□□□□ 0.61
USE1-201ENST00000263897 KATNBL1Q9H079 304 aa18.84■□□□□ 0.61
USE1-201ENST00000263897 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
USE1-201ENST00000263897 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
USE1-201ENST00000263897 CYP21A2P08686 494 aa18.83■□□□□ 0.6
USE1-201ENST00000263897 MAGEA10P43363 369 aaPredicted RBP18.83■□□□□ 0.6
USE1-201ENST00000263897 C1orf53Q5VUE5 145 aa18.83■□□□□ 0.6
USE1-201ENST00000263897 UBAC1Q9BSL1 405 aa18.83■□□□□ 0.6
USE1-201ENST00000263897 TSEN34Q9BSV6 310 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms