RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 HAUS4Q9H6D7 363 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 DDX25Q9UHL0 483 aaKnown RBP19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 TRIM68Q6AZZ1 485 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 NELFCDQ8IXH7 590 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 ATF7P17544 494 aaPredicted RBP19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 GNGT1P63211 74 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 KRT26Q7Z3Y9 468 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 LMNB1P20700 586 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 CYP2J2P51589 502 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 EFCC1Q9HA90 598 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 ANKFY1Q9P2R3 1169 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 USP19O94966 1318 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 PPARAQ07869 468 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 NXNQ6DKJ4 435 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 DPP8Q6V1X1 898 aaPredicted RBP19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 MRFAP1L1Q96HT8 127 aa19.12■□□□□ 0.65
NOTCH3-201ENST00000263388 GNPTABQ3T906 1256 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 CSRNP1Q96S65 589 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 TGFBRAP1Q8WUH2 860 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 RABGGTAQ92696 567 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 DRC3Q9H069 523 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 LAD1O00515 517 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 PRDM1O75626 825 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 CMA1P23946 247 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 ATP10DQ9P241 1426 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 FAM178BQ8IXR5 827 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 ANKRD42Q8N9B4 389 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 PSPC1Q8WXF1 523 aaKnown RBP19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 MYCBPQ99417 103 aaPredicted RBP19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 SUN1O94901 812 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 RIPOR2Q9Y4F9 1068 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 PZPP20742 1482 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 AP1ARQ63HQ0 302 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 GSTA1P08263 222 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 GSTA2P09210 222 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 PSTPIP2Q9H939 334 aa19.11■□□□□ 0.65
NOTCH3-201ENST00000263388 RPN1P04843 607 aaKnown RBP19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 ATF2P15336 505 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 BSPRYQ5W0U4 402 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 KLHDC4Q8TBB5 520 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 CHURC1Q8WUH1 139 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 TAF5LO75529 589 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 DEPTORQ8TB45 409 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 NEURL1BA8MQ27 555 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 ARHGEF16Q5VV41 709 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 RASEFQ8IZ41 740 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 SUCLG2Q96I99 432 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 ZMAT2Q96NC0 199 aaKnown RBP19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 QRICH2Q9H0J4 1663 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 ALDH1B1P30837 517 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 LONP1P36776 959 aaKnown RBP19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 TFAP4Q01664 338 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 H0YIN7 160 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 POLR2BP30876 1174 aaKnown RBP19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 TECP42680 631 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 GDAP1L1Q96MZ0 367 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 ST7Q9NRC1 585 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 ATP1A2P50993 1020 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 RBBP5Q15291 538 aaKnown RBP19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 SNCBQ16143 134 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 CUEDC2Q9H467 287 aa19.1■□□□□ 0.65
NOTCH3-201ENST00000263388 CXorf38Q8TB03 319 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 BCAS4Q8TDM0 211 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 BAG5Q9UL15 447 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 BTG4Q9NY30 223 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 BIN2Q9UBW5 565 aaPredicted RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 GJA3Q9Y6H8 435 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 CPXCR1Q8N123 301 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 SERTAD1Q9UHV2 236 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 EPN1Q9Y6I3 576 aaPredicted RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 CAPN9O14815 690 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 OR52Z1P0C646 297 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 LRRC8CQ8TDW0 803 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 STAG1Q8WVM7 1258 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 CCNL1Q9UK58 526 aaPredicted RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 ORC6Q9Y5N6 252 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 GOLGA8CPA6NN73 597 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 PDE6BP35913 854 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 LIG4P49917 911 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 ETF1P62495 437 aaKnown RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 SPATA1Q5VX52 437 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 TTC37Q6PGP7 1564 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 DESI2Q9BSY9 194 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 GARSP41250 739 aaKnown RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 YARSP54577 528 aaKnown RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 METTL13Q8N6R0 699 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 ZSWIM6Q9HCJ5 1215 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 GTPBP6O43824 516 aaPredicted RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 CLTAP09496 248 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 ZAP70P43403 619 aa19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 FAF1Q9UNN5 650 aaPredicted RBP19.09■□□□□ 0.65
NOTCH3-201ENST00000263388 ZYXQ15942 572 aaKnown RBP19.08■□□□□ 0.65
NOTCH3-201ENST00000263388 CDKL2Q92772 493 aa19.08■□□□□ 0.65
NOTCH3-201ENST00000263388 TNNC2P02585 160 aa19.08■□□□□ 0.65
NOTCH3-201ENST00000263388 FAM102BQ5T8I3 360 aa19.08■□□□□ 0.65
NOTCH3-201ENST00000263388 COL4A3BPQ9Y5P4 624 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms