RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 GJB2P29033 226 aa28.21■■■□□ 2.11
SCN1B-201ENST00000262631 SMC3Q9UQE7 1217 aa28.21■■■□□ 2.11
SCN1B-201ENST00000262631 MYPNQ86TC9 1320 aa28.21■■■□□ 2.11
SCN1B-201ENST00000262631 ZBTB5O15062 677 aa28.2■■■□□ 2.11
SCN1B-201ENST00000262631 TAL1P17542 331 aaPredicted RBP28.2■■■□□ 2.11
SCN1B-201ENST00000262631 REPS2Q8NFH8 660 aa28.2■■■□□ 2.11
SCN1B-201ENST00000262631 HMGN5P82970 282 aaKnown RBP28.19■■■□□ 2.1
SCN1B-201ENST00000262631 AKAP17AQ02040 695 aaKnown RBP28.19■■■□□ 2.1
SCN1B-201ENST00000262631 CCDC174Q6PII3 467 aa28.19■■■□□ 2.1
SCN1B-201ENST00000262631 PNMA3Q9UL41 463 aa28.19■■■□□ 2.1
SCN1B-201ENST00000262631 ZNF536O15090 1300 aa28.19■■■□□ 2.1
SCN1B-201ENST00000262631 PNMA6FA0A0J9YX94 578 aa28.19■■■□□ 2.1
SCN1B-201ENST00000262631 DEXIO95424 95 aa28.19■■■□□ 2.1
SCN1B-201ENST00000262631 PFKFB3Q16875 520 aaPredicted RBP28.19■■■□□ 2.1
SCN1B-201ENST00000262631 GPKOWQ92917 476 aaPredicted RBP eCLIP28.19■■■□□ 2.1
SCN1B-201ENST00000262631 SEC63Q9UGP8 760 aaKnown RBP28.19■■■□□ 2.1
SCN1B-201ENST00000262631 SCG2P13521 617 aa28.18■■■□□ 2.1
SCN1B-201ENST00000262631 LBX2Q6XYB7 198 aa28.18■■■□□ 2.1
SCN1B-201ENST00000262631 SHISA4Q96DD7 197 aa28.18■■■□□ 2.1
SCN1B-201ENST00000262631 GJB4Q9NTQ9 266 aa28.18■■■□□ 2.1
SCN1B-201ENST00000262631 TMEM132BQ14DG7 1078 aa28.17■■■□□ 2.1
SCN1B-201ENST00000262631 IPO9Q96P70 1041 aaKnown RBP28.17■■■□□ 2.1
SCN1B-201ENST00000262631 RAVER2Q9HCJ3 691 aaKnown RBP28.17■■■□□ 2.1
SCN1B-201ENST00000262631 TXNRD2Q9NNW7 524 aa28.17■■■□□ 2.1
SCN1B-201ENST00000262631 BTBD7Q9P203 1132 aa28.17■■■□□ 2.1
SCN1B-201ENST00000262631 ZBED4O75132 1171 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 WWC2Q6AWC2 1192 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 CPXCR1Q8N123 301 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 SMCR8Q8TEV9 937 aaPredicted RBP28.16■■■□□ 2.1
SCN1B-201ENST00000262631 AGBL1Q96MI9 1066 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 PARK7Q99497 189 aaKnown RBP28.16■■■□□ 2.1
SCN1B-201ENST00000262631 ZCCHC17Q9NP64 241 aaKnown RBP28.16■■■□□ 2.1
SCN1B-201ENST00000262631 RBM27Q9P2N5 1060 aaKnown RBP28.16■■■□□ 2.1
SCN1B-201ENST00000262631 ZNF214Q9UL59 606 aaPredicted RBP28.16■■■□□ 2.1
SCN1B-201ENST00000262631 TYW1BQ6NUM6 668 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 HEATR3Q7Z4Q2 680 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 RBPJLQ9UBG7 517 aa28.16■■■□□ 2.1
SCN1B-201ENST00000262631 CNMDO75829 334 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 MAP2K2P36507 400 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 FOSBP53539 338 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 USH1GQ495M9 461 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 FAM184AQ8NB25 1140 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 COA7Q96BR5 231 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 ALG1Q9BT22 464 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 PAGR1Q9BTK6 254 aa28.15■■■□□ 2.1
SCN1B-201ENST00000262631 A0A0G2JMZ2 1700 aa28.14■■■□□ 2.1
SCN1B-201ENST00000262631 ICAM1P05362 532 aa28.14■■■□□ 2.1
SCN1B-201ENST00000262631 FDX1P10109 184 aa28.14■■■□□ 2.1
SCN1B-201ENST00000262631 TAF1CQ15572 869 aaPredicted RBP28.14■■■□□ 2.1
SCN1B-201ENST00000262631 OTUD7BQ6GQQ9 843 aa28.14■■■□□ 2.1
SCN1B-201ENST00000262631 FBXO11Q86XK2 927 aa28.14■■■□□ 2.1
SCN1B-201ENST00000262631 VPS54Q9P1Q0 977 aa28.14■■■□□ 2.1
SCN1B-201ENST00000262631 DAXXQ9UER7 740 aaPredicted RBP28.14■■■□□ 2.1
SCN1B-201ENST00000262631 MB21D1Q8N884 522 aa28.13■■■□□ 2.09
SCN1B-201ENST00000262631 AMNQ9BXJ7 453 aa28.13■■■□□ 2.09
SCN1B-201ENST00000262631 BARHL2Q9NY43 387 aa28.13■■■□□ 2.09
SCN1B-201ENST00000262631 CTDP1Q9Y5B0 961 aaPredicted RBP28.13■■■□□ 2.09
SCN1B-201ENST00000262631 PCDHA1Q9Y5I3 950 aa28.13■■■□□ 2.09
SCN1B-201ENST00000262631 STXBP3O00186 592 aa28.13■■■□□ 2.09
SCN1B-201ENST00000262631 CCPG1Q9ULG6 757 aa28.13■■■□□ 2.09
SCN1B-201ENST00000262631 ADGRA2Q96PE1 1338 aa28.12■■■□□ 2.09
SCN1B-201ENST00000262631 PLS1Q14651 629 aa28.12■■■□□ 2.09
SCN1B-201ENST00000262631 WASF1Q92558 559 aa28.12■■■□□ 2.09
SCN1B-201ENST00000262631 RIPK3Q9Y572 518 aa28.12■■■□□ 2.09
SCN1B-201ENST00000262631 COL11A1P12107 1806 aaPredicted RBP28.12■■■□□ 2.09
SCN1B-201ENST00000262631 ATP2A1O14983 1001 aa28.11■■■□□ 2.09
SCN1B-201ENST00000262631 CRHR2Q13324 411 aa28.11■■■□□ 2.09
SCN1B-201ENST00000262631 Q3C1V9 767 aa28.11■■■□□ 2.09
SCN1B-201ENST00000262631 SNRNP48Q6IEG0 339 aaKnown RBP28.11■■■□□ 2.09
SCN1B-201ENST00000262631 REM2Q8IYK8 340 aaPredicted RBP28.11■■■□□ 2.09
SCN1B-201ENST00000262631 ANKRD13CQ8N6S4 541 aa28.11■■■□□ 2.09
SCN1B-201ENST00000262631 RABGAP1Q9Y3P9 1069 aa28.11■■■□□ 2.09
SCN1B-201ENST00000262631 THSD7BQ9C0I4 1608 aa28.11■■■□□ 2.09
SCN1B-201ENST00000262631 OAZ1P54368 228 aa28.1■■■□□ 2.09
SCN1B-201ENST00000262631 TEX13BQ9BXU2 312 aa28.1■■■□□ 2.09
SCN1B-201ENST00000262631 STAT3P40763 770 aa28.1■■■□□ 2.09
SCN1B-201ENST00000262631 GCLCP48506 637 aaPredicted RBP28.1■■■□□ 2.09
SCN1B-201ENST00000262631 GTF3C2Q8WUA4 911 aaPredicted RBP28.1■■■□□ 2.09
SCN1B-201ENST00000262631 SPATC1LQ9H0A9 340 aa28.1■■■□□ 2.09
SCN1B-201ENST00000262631 GUCY1B3Q02153 619 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 C8orf76Q96K31 380 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 R3HDMLQ9H3Y0 253 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 HOMER2Q9NSB8 354 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 CPA4Q9UI42 421 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 KCNJ14Q9UNX9 436 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 MYH6P13533 1939 aa28.09■■■□□ 2.09
SCN1B-201ENST00000262631 SMCHD1A6NHR9 2005 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 CA12O43570 354 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 ALAS1P13196 640 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 NAPAP54920 295 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 ERVK-9P63128 1117 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 ERVK-24P63145 666 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 LARP1BQ659C4 914 aaKnown RBP28.08■■■□□ 2.09
SCN1B-201ENST00000262631 ZFYVE28Q9HCC9 887 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 KIF3AQ9Y496 699 aa28.08■■■□□ 2.09
SCN1B-201ENST00000262631 hCG_1984214I3L0E3 225 aa28.07■■■□□ 2.08
SCN1B-201ENST00000262631 OPLAHO14841 1288 aa28.07■■■□□ 2.08
SCN1B-201ENST00000262631 TLR2O60603 784 aa28.07■■■□□ 2.08
SCN1B-201ENST00000262631 ALDH1A1P00352 501 aa28.07■■■□□ 2.08
SCN1B-201ENST00000262631 ZNF713Q8N859 430 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms